Gene Information

Name : VVMO6_02764 (VVMO6_02764)
Accession : YP_004189989.1
Strain :
Genome accession: NC_014965
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate sugar epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 2964686 - 2966638 bp
Length : 1953 bp
Strand : -
Note : -

DNA sequence :
ATGGATAAGTTGGCTTACATTTGGTCTTTACCTCGAGTACATAAGCGCTTGATCAGTTTGGCCATAGATACCTTATTGAT
TACCTTTTCTTTTTTCATGGCAATTTGGGTGCGTCATGGCGAAGTGGCTGTTTCTGTTTCTGCGGAAACATGGCTAACAC
TCGCGGGCACGGTTGTGGTTACCCTAATCGCCTTTACAAGATTAGGCTTGTACCGAGCGGTACTGCGTTATCTCACCTTT
CATGCGCTTACCGTGGTGGTGCTTGGTGCGTTGATTTCCGCACTCTCGATCACAACTTTTGCGTATTTTTTCAATGCAGA
AGTGCCTCGTACAGTGCCTGTTATCTACATGACGTTTTTAGCACTGTTGTGTGGTGGTGCACGCATGATGGTGCGTTCAT
TAATCGTGCAGGCTAGTCGCAAAGGGTGTGAGCGCGTGCTGATATATGGTGCAGGAAGTACAGGGCGCCAGTTGGCCATT
GCGCTTCGTAATGCGGAAACCTACCAGGTGAAAGGGTTTATTGATAATGATCCTTCTCTTGAAAACACCATTATTCAAGG
CTTAACGGTACACTCTTCTCAGCAGATTTCTAGTCTGGTTGAAAAGCAAGAAATTGAAAAGATCTTGCTGGCCATGCCAA
GAGCCACACGCTCTGAACGCAAAGCCATTATTGACGGATTACTGCACTTACCCGTAGAAGTGCTAACCGTACCGGATTTT
AAAGACATCGTTAATGGCAATGCCACGGTCGATGAGCTTAAAGATGTTGCCATTGAAGACTTGCTCGGCCGCGACCCTGT
AGAGCCCAATCCTGAACTGATGAAAGCCAATATTCACGGTAAAGTGGTGATGGTAACTGGTGCAGGCGGTTCGATCGGTT
CTGAGCTTTGCCGTCAGATTGTACGCCAAAAGCCAAAAACCTTGATTCTATTTGAGTTATCTGAATACGGCTTGTACGAA
ATTGATAAAGAGCTGTCTGGCATGGTGGAAGCTATGCAGCTTGAAGTGGAAATCATACCGTTGTTAGGCTCTGTGCAGCG
AATCAACCGCCTAAGTGCCACTATGCGAGCGTTTGGTGTGCAAACGGTTTATCACGCAGCGGCTTATAAGCACGTTCCTT
TGGTGGAATACAACGTGGTGGAAGGGGTTCGCAACAACGTATTTGGTACCTACTACAGCGCGAAAGCCGCGATTGAAGCT
GGTGTGGAATCTTTTGTGTTGATCTCAACAGACAAAGCGGTGCGCCCAACCAATGTGATGGGCACTTCTAAGCGTATGGC
AGAACTTGCACTTCAAGCCTTGGCGGCAAAAGAAAATGACAAAGTGAACGGTACGCGTTTTTGCATGGTGCGCTTTGGTA
ATGTGCTTGGCTCGTCCGGCTCGGTAATTCCACTATTTAAGCGTCAAATTGAAGAAGGGCAGGCTATTACGGTTACCCAC
CCAGATATCATCCGCTACTTTATGACCATTCCTGAAGCTGCTCAGCTTGTTATACAGGCTGGTGCAATGGGCAAAGGTGG
CGATGTGTTTGTGTTGGATATGGGTGAGCCCGTTAAAATTGTCGATCTGGCGAAAAATCTTATTCAGTTATCAGGCCTTG
AAGTGAAGTCTTCTGATAATCCGAACGGTGATATCGAAATCAAATTTACAGGTCTTCGCCCTGGTGAAAAGCTCTATGAA
GAGTTATTGATTGGTGACAATGTGGAAGGCACCGATCACGAACGAATCATGACGGCAAACGAGCAATTTTTACCGCTCGA
AGAGTTTAATCAGATTCTCGATAACTTAGACAGAGCCTGTCATGAGTTTGATCATGAAACCATACGTCAAATCTTGTTGG
AAACACCTACAGGCTTTAACCCTACAGACGGTATTGGTGATTTAGTTTGGAATGCCAAGCGAAAGCTCAATGCCTCTAAA
GATAAAGTGGTTGAGATTAAAGTCACCGCTTAG

Protein sequence :
MDKLAYIWSLPRVHKRLISLAIDTLLITFSFFMAIWVRHGEVAVSVSAETWLTLAGTVVVTLIAFTRLGLYRAVLRYLTF
HALTVVVLGALISALSITTFAYFFNAEVPRTVPVIYMTFLALLCGGARMMVRSLIVQASRKGCERVLIYGAGSTGRQLAI
ALRNAETYQVKGFIDNDPSLENTIIQGLTVHSSQQISSLVEKQEIEKILLAMPRATRSERKAIIDGLLHLPVEVLTVPDF
KDIVNGNATVDELKDVAIEDLLGRDPVEPNPELMKANIHGKVVMVTGAGGSIGSELCRQIVRQKPKTLILFELSEYGLYE
IDKELSGMVEAMQLEVEIIPLLGSVQRINRLSATMRAFGVQTVYHAAAYKHVPLVEYNVVEGVRNNVFGTYYSAKAAIEA
GVESFVLISTDKAVRPTNVMGTSKRMAELALQALAAKENDKVNGTRFCMVRFGNVLGSSGSVIPLFKRQIEEGQAITVTH
PDIIRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIVDLAKNLIQLSGLEVKSSDNPNGDIEIKFTGLRPGEKLYE
ELLIGDNVEGTDHERIMTANEQFLPLEEFNQILDNLDRACHEFDHETIRQILLETPTGFNPTDGIGDLVWNAKRKLNASK
DKVVEIKVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_02764 YP_004189989.1 nucleoside-diphosphate sugar epimerase/dehydratase VFG0029 Protein 1e-119 47
VVMO6_02764 YP_004189989.1 nucleoside-diphosphate sugar epimerase/dehydratase VFG1300 Protein 3e-77 45