Gene Information

Name : VVMO6_02522 (VVMO6_02522)
Accession : YP_004189747.1
Strain :
Genome accession: NC_014965
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 2713900 - 2715432 bp
Length : 1533 bp
Strand : -
Note : -

DNA sequence :
ATGACTGATGCTGTTCAAAACGAAACTGTACAAGAAGCCTCTGCACAAGAAGAGAATAAGCTCATTGCTGAACGCCGCGC
AAAATTGGATCAAATCCGAAAGAGCTGCAAAGCAAATGGCCACCCAAACGACTTCCGTCGTGACAGCCTAGCTGGCGACC
TTCAAAAAGAGTTCGGTGAAAAGAGTAAGGAAGAGCTAGAAGCACTTAACCACGTTGTTGCTATTGCGGGTCGTGTTATG
GCGAAACGTGGTCCATTCTTGGTGATCCAAGAAACTTCTGGTCGTATCCAGGCTTACGCGGACAAAGATGTACAAAAAGT
ATTGAAAGACAAATACCAAGGTCTTGATATCGGTGACATCATCGGTGTGAAAGGTGCGCTGCACAAATCTGGCAAAGGCG
ACCTATACGTAAACATGGAAGAGTACGAGTTGCTAACTAAAGCACTTCGTCCACTGCCAGAGAAGTTCCACGGTCTCACT
GACCAAGAAATGCGTTACCGTCAGCGTTATGTTGACCTCATCGTGAATGAAGATTCTCGTAATGCGTTTGTAGTACGTTC
AAAAGTGATGTCGGCAATCCGTAATTTCATGATCTCTAAACAGTTCATGGAAGTTGAAACGCCAATGATGCACGTGATCC
CTGGCGGTGCGAGTGCGCGTCCATTTGTTACGCACCACAATGCGCTAGATATGCCAATGTACCTACGTATTGCGCCAGAG
CTATACCTGAAGCGTCTAGTTGTTGGTGGTTTTGATCGCGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGTCTTTC
TCCACGTCACAACCCTGAATTCACTATGATGGAATTCTACATGGCGTACGCGGACTACAAAGATCTGATGGATCTAACTG
AAGAGCTACTAAGCTCGGTGGCTTTAGAAGTTCTAGGTTCAACGTCAATGCCTTACGGTGAGCATACTGTTGAGTTTGGT
GGTACATACACTCGCATGAGCATGTTTGAAGCAATCAAGCACTACAACCCAGACCACGCGCAAATCCAAGCGCTAACAGA
AGAAGACATTCAAAACCGTGACCTAATGGTTTCTATCGCGAAATCGGTTCACGTAGAAGTCGAACCTTTCTGGACATGTG
GTCAGCTTCTTGAAGAGATCTTTGGTGAAACAGCAGAACCTAAGCTAATGCAGCCAACGTTCATCACTGGCTACCCAGCA
GATATCTCTCCACTGGCTCGTCGTAGCGATGACAACCCGTTCTTCACAGACCGCTTTGAGTTCTTCATCGGTGGCCGTGA
AGTGGCGAACGGTTTCTCTGAGCTTAACGATGCAGAAGACCAAGACGCACGTTTCAAAGCACAGGTTGAAGCGAAAGAGT
CGGGTGATGATGAAGCCATGTTCTACGATGCAGACTACATCACAGCACTAGAGCACGGCCTACCACCGACTGCTGGTCAA
GGTATCGGCATCGACCGTCTAGTGATGCTACTGACCAACACGCACACGATTCGTGACGTTATTCTATTCCCAGCGATGCG
TCCTCAGGCGTAA

Protein sequence :
MTDAVQNETVQEASAQEENKLIAERRAKLDQIRKSCKANGHPNDFRRDSLAGDLQKEFGEKSKEELEALNHVVAIAGRVM
AKRGPFLVIQETSGRIQAYADKDVQKVLKDKYQGLDIGDIIGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLT
DQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFVTHHNALDMPMYLRIAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFG
GTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPA
DISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLVMLLTNTHTIRDVILFPAMRPQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-131 58
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 2e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVMO6_02522 YP_004189747.1 lysyl-tRNA synthetase VFG1668 Protein 5e-131 58