Gene Information

Name : Thebr_1798 (Thebr_1798)
Accession : YP_004186716.1
Strain : Thermoanaerobacter brockii Ako-1
Genome accession: NC_014964
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1785250 - 1787388 bp
Length : 2139 bp
Strand : -
Note : KEGG: tpd:Teth39_1753 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold

DNA sequence :
ATGAATAGGATAAAAGATATATTAAAGAAAGAATTTGGATTAAAAGACTTTCAAGTGGAAAATACAATAAAGCTTATTGA
TGAAGGGAATACAATTCCTTTTATTGCAAGGTACAGGAAAGAAGCAACAGGAAGCTTGTCAGATGAGGTTTTAAGAAATT
TTTATGACCGACTTACATATTTGAGAAACCTTGAAGAGAAGAAACAGGATACTATAAGGTTAATTGATGAACAGGGAAAA
CTGACAGAGGAGATAAAAGCAAAAATAGAAAATGCTACAACTTTACAAGAGGTGGAGGACATATACAGGCCTTTTAGGCC
AAAAAGAAGGACAAGGGCGACCATTGCGAAAGAAAAAGGCTTGGAGCCTCTTGCAAAGGTTATTTCTTCAAATGAAGTAA
TAGATGGGGATGTAAAGGAATACGCAAAGCCTTATCTTAATGAAAATGTTCCAACAGTTGAAGAAGCATACCAAGGAGCA
ATGGATATAATTGCAGAGGATATATCTGATGACGCTGATATAAGAAAATACATAAGAAGTTTTACATGGAATAACGGAAT
TATAGTGACACAAGCGTTAAAACAAGAAAGGTCTCCCTATGAGATGTATTATGACTATAAAGAAGCTGTAAAGACAATAC
CGCCTCATAGAATACTGGCGATAAATAGGGCAGAAAGGGAAAAATACATATCTGTAAAAATTGAGATAGATAGTGAAAGG
ATAATAAATAGGCTTATAGAATCAAAAGTAAATAAAGCTTCAATATTTGCAGAGTATTACAAGAAAGCAATTGAAGATTC
CTATAAAAGGCTTATTGCTCCTTCAATAGAGAGGGAAATAAGGAATACTCTTACGGAAAAAGCAGAAGAAAAGGCAATAA
TAGTTTTTAAAGAAAATCTAAAAAGCCTTTTACTTCAACCCCCAATAAAAGGACATGTTGTCATGGGATTTGACCCAGCC
TATAGGACAGGATGTAAAATTGCTGTTGTAGATGAAACGGGAAAACTTTTGGACACTGCTACAGTATATCCTACTCCTCC
TCAAAATGATTTTGAAAATTCTAAAAAGGTTTTAAAAGAGCTAATAGAAAAATACAATGTCACTTTAATTGCTTTGGGAA
ATGGAACTGCTTCAAGAGAGAGTGAAATGTTTATAGCAGAGCTTATAAAAGAACTTTCAAGAGAGGTAAAGTATGTGATA
GTGAATGAAGCAGGGGCATCAGTCTATTCTGCTTCTCAAATAGGTACAGAGGAATTTCCTGATATAAACGTAAGTTTAAG
AGGAGCTATCTCACTGGCGCGAAGGCTTCAAGACCCATTGGCAGAGCTTGTAAAAATTGATCCAAAGTCCATCGGGGTAG
GACAGTATCAACACGATGTAGACCAGAAAAAACTGGGAGATGCTTTAAACGGTGTTGTAGAAGATTGTGTAAACAGCGTA
GGTGTTGATTTAAACACTGCATCAGTATCTCTTTTAAAATACGTTTCAGGGATAAATGCTGCTATTGCCAAGAATATTGT
TGAATATCGAAACCAAATAGGCAAGTTTACAAATAGGGAGCAGCTTAAAAATGTAAAAAGATTAGGAGATACTACTTTTA
CACAATGTGCGGGTTTTTTGAGAATTTTGGACGGTGACAATATCTTTGACTCAACAGCAGTTCACCCAGAGCGTTACGAA
ACCTTAGAAAAGCTTTTGAGAAAATTTAGATATGAGAAAGAAAAACTAGATAGAAAAAAGTTAAAAGACTTTGCTAATTC
TTTAGAAGAATACGGATTAGAGAAGATTTCAGAGGAATACGATATAGGACTTCCTACACTTTATGACATAGTTTCAGAGC
TTAAAAAACCTGGAAGAGACCCAAGAGAAGACTTACCCAAGCCCATTTTAAGGTCTGATGTAATGACTATAAATGAGCTA
AAACCAGGCATGGAACTTATGGGAACAGTTAGGAATGTCACTGATTTTGGCTGCTTTGTAGATATAGGTGTTCACACTGA
TGGGCTTGTTCACATTTCTGAGATGTCTCAAAATTACATAAAACATCCTCTTGATGTGGTTTCAGTGGGAGACATTGTAA
AAGTTAGAGTTTTAAGTGTTGATATTGAGAGAAATAGAATTTCTCTTTCAATGAAATAA

Protein sequence :
MNRIKDILKKEFGLKDFQVENTIKLIDEGNTIPFIARYRKEATGSLSDEVLRNFYDRLTYLRNLEEKKQDTIRLIDEQGK
LTEEIKAKIENATTLQEVEDIYRPFRPKRRTRATIAKEKGLEPLAKVISSNEVIDGDVKEYAKPYLNENVPTVEEAYQGA
MDIIAEDISDDADIRKYIRSFTWNNGIIVTQALKQERSPYEMYYDYKEAVKTIPPHRILAINRAEREKYISVKIEIDSER
IINRLIESKVNKASIFAEYYKKAIEDSYKRLIAPSIEREIRNTLTEKAEEKAIIVFKENLKSLLLQPPIKGHVVMGFDPA
YRTGCKIAVVDETGKLLDTATVYPTPPQNDFENSKKVLKELIEKYNVTLIALGNGTASRESEMFIAELIKELSREVKYVI
VNEAGASVYSASQIGTEEFPDINVSLRGAISLARRLQDPLAELVKIDPKSIGVGQYQHDVDQKKLGDALNGVVEDCVNSV
GVDLNTASVSLLKYVSGINAAIAKNIVEYRNQIGKFTNREQLKNVKRLGDTTFTQCAGFLRILDGDNIFDSTAVHPERYE
TLEKLLRKFRYEKEKLDRKKLKDFANSLEEYGLEKISEEYDIGLPTLYDIVSELKKPGRDPREDLPKPILRSDVMTINEL
KPGMELMGTVRNVTDFGCFVDIGVHTDGLVHISEMSQNYIKHPLDVVSVGDIVKVRVLSVDIERNRISLSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-142 45