Gene Information

Name : Thebr_1283 (Thebr_1283)
Accession : YP_004186240.1
Strain : Thermoanaerobacter brockii Ako-1
Genome accession: NC_014964
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1288184 - 1289482 bp
Length : 1299 bp
Strand : -
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: tpd:Teth39_1254 flagellar protein export ATPase FliI; SMART: AAA ATPase

DNA sequence :
TTGAATAAATATAAAAAGGCTCTTCAAGAAAAAAGGCTAATTCAATATTATGGGAAAGTTTCTCAAGTAATAGGATTAAC
AATCGAAAGTACAGGGCCTCTTTCCAACATAGGAGAAATATGTAATATCAAGACTATTAACGGAAATACAATTTTGGCAG
AAGTTGTAGGTTTTAAAGAAGAAAAAGTGTATCTCATGCCCTTAGGAAATATGGAGGGAATAGGAGCTGGCAGCAAAGTT
ATAGCTACAGGTCAAACCCTTAGAGTTAACGTAGGAAATGAACTCCTCGGAAGGGTATTAGACGGTTTAGGCAATCCTAT
AGATGGCAAAGGACCGATAAAATTTGAAAAATCTATTCCTATTAATAATGTGCCACCTGACCCTTTGGAAAGGAAGCGAA
TTAGAGAAGTTATGTCTCTTGGTATAAAAGCGATAGATGGACTACTTACCTGCGGCAAAGGGCAGAGAATTGGTATTTTT
GCAGGAAGTGGTGTAGGAAAAAGCACGCTGTTAGGCATGATGGCAAGAAACGCGAAAGCTGATTTAAATGTAATAGCTCT
CATAGGAGAAAGGGGAAGAGAAGTAAATGAATTTTTAGAAAAAGATTTGGGGGAAGAAGGCTTAAAAAAATCTGTAGTTG
TAGTAGCTACTTCTGATACCCCAGCTCTTATAAGAGTAAAAGGCGCTATGACTGCAACTGCTATAGCTGAATATTTTAGA
GACCAAGGGTTAGATGTTCTTTTGATGATGGATTCAGTCACTCGTTTTGCCATGGCTCAAAGAGAAGTAGGGCTTTCTAT
AGGGGAAGCTCCTGTTTCACGAGGTTATACTCCTTCTGTCTTTTCAGTTTTACCTAAGCTTTTAGAACGATCTGGATGTT
CTAAAAAAGGCTCTATTACAGCTCTTTACACTGTGCTAGTAGATGGGGATGATTTGAATGAGCCAATTGCTGACGCAGTA
AGGGGTATACTCGATGGGCACATAGTTTTGTCAAGGAAACTGGCTAATAAAAACCATTATCCTGCTATTGATGTATTAGC
AAGTGTTAGCAGGGTGATAAATGACATAATTACAGAAGAACATAAAGAACTAATAGCGAGGTTTAAAGATATTTTGGCGA
CTTACACAGAAGCGGAGGATTTAATAAATATAGGAGCATATAATTTTGGCAGTAATCCTAAAATTGATGAGGCCATTGAG
CTAAACGACAAAATGAACAATTTTCTTAGGCAGAGAATAGACGAGTCTTATGACTTTGAAACTACAAAACAACTGCTATA
TGAATCTATTAAAAGGTGA

Protein sequence :
MNKYKKALQEKRLIQYYGKVSQVIGLTIESTGPLSNIGEICNIKTINGNTILAEVVGFKEEKVYLMPLGNMEGIGAGSKV
IATGQTLRVNVGNELLGRVLDGLGNPIDGKGPIKFEKSIPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIF
AGSGVGKSTLLGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTATAIAEYFR
DQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSGCSKKGSITALYTVLVDGDDLNEPIADAV
RGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIE
LNDKMNNFLRQRIDESYDFETTKQLLYESIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-108 56
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-104 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-103 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-104 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-104 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-103 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-103 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-103 52
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-93 51
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-93 51
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-93 51
escN AAC31513.1 L0034 Virulence LEE Protein 3e-93 51
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-93 51
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-93 51
escN AAC38383.1 EscN Virulence LEE Protein 3e-93 51
escN AAK26715.1 EscN Virulence LEE Protein 2e-93 51
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-93 51
escN AAL57542.1 EscN Virulence LEE Protein 2e-93 51
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-93 51
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-93 51
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-89 51
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-89 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-100 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-100 51
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-91 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-86 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-86 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-87 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-87 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-94 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-87 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-79 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-79 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-82 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-83 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-83 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 9e-91 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-79 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-79 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-87 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 3e-82 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-82 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-82 44
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-73 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-73 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-73 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-73 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 7e-76 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-75 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-72 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG2144 Protein 5e-113 56
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0048 Protein 7e-109 55
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0390 Protein 1e-106 54
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0192 Protein 2e-110 54
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0730 Protein 2e-93 51
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0812 Protein 2e-93 51
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG1254 Protein 5e-103 50
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0515 Protein 2e-87 50
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG2331 Protein 1e-94 48
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG2499 Protein 3e-96 48
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG0555 Protein 6e-74 43
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG1008 Protein 6e-73 43
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG1778 Protein 6e-73 43
Thebr_1283 YP_004186240.1 FliI/YscN family ATPase VFG2459 Protein 6e-81 42