Gene Information

Name : Thebr_1270 (Thebr_1270)
Accession : YP_004186227.1
Strain : Thermoanaerobacter brockii Ako-1
Genome accession: NC_014964
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1279409 - 1280074 bp
Length : 666 bp
Strand : -
Note : KEGG: tpd:Teth39_1241 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGAATTTAGGAGATTTGGTTTCATCAGTGACAGCTCCTTCAAATATGGCAACAAGTTTACAAATAGTTCTTCTATTAAC
AGTTTTGACATTAGCTCCATCTATTTTAATAATGATGACTTCTTTTACTCGGATAGTGATTGTATTATCTTTTTTAAGAA
ATGCATTGGGGCTACAGCAAATGCCTCCTAATCAAGTACTAATTGGTTTGGCTTTGTTTCTCACTTTATTCATAATGGCA
CCAATTGGGCAAGATATCAACAATAATGCTATTAAACCTTATACTGAAGGAAAAATAACTCAAGAGGAAGCGTATCAAAA
TGCTATCAAACCATTGAAAAATTTTATGTTGAAGCAAACAAGGCAAAGTGATTTAAATCTTTTTGTAAGTTTAGCTAAAA
TTAAAGTAAATAATGCAGAAGACCTTCCCATGAGAGTGGTCATTCCTTCTTTTATCATCAGTGAATTAAAAACTGCTTTT
GAAATTGGCTTTATAATTTACATTCCCTTTTTGATAATTGATATAGTAGTCGCCAGTGTTTTAATGTCAATGGGTATGTT
TATGTTGCCACCTGTTTTGATATCTCTTCCCTTTAAAGTGTTACTTTTTATTTTGGTGGATGGATGGAACCTGGTTGTAA
AATCTTTGATTTTAGGTTTTAGATAG

Protein sequence :
MNLGDLVSSVTAPSNMATSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLSFLRNALGLQQMPPNQVLIGLALFLTLFIMA
PIGQDINNNAIKPYTEGKITQEEAYQNAIKPLKNFMLKQTRQSDLNLFVSLAKIKVNNAEDLPMRVVIPSFIISELKTAF
EIGFIIYIPFLIIDIVVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-25 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-25 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thebr_1270 YP_004186227.1 flagellar biosynthetic protein FliP VFG1259 Protein 3e-47 58
Thebr_1270 YP_004186227.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-45 57
Thebr_1270 YP_004186227.1 flagellar biosynthetic protein FliP VFG2338 Protein 8e-44 56
Thebr_1270 YP_004186227.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-44 54