Gene Information

Name : AciPR4_0987 (AciPR4_0987)
Accession : YP_004181814.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1166740 - 1169220 bp
Length : 2481 bp
Strand : -
Note : KEGG: aca:ACP_2765 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTCGAACGCTATACAGAAAAAGCGCGACGCGTAATTTTCTTTGCGCGTTACGAGGCCAGCCAGTTTGGGTCGCCCTA
CATCGAGACCGAGCACCTGCTTTTGGGCCTGCTTCGCGAAGACAAGGCACTCACCAACCGCTTCCTGCGCTCCCACGCAT
CGGTAGAGTCGATCCGGAAACAGATCGAGGGCCACACGACGATTCGGGAGAAGGTGTCGACTTCGGTCGATCTGCCGCTT
TCGAACGAGTGCAAGCGCGTTCTGGCGTATGCGGCGGAAGAAGCTGAACGACTTTCCCATAAACACATCGGCACGGAACA
CCTCCTGCTGGGCCTGTTGCGCGAAGAAAAGTGCTTCGCTGCCGAGATTCTGCAGGAACGTGGCTTGCGCCTCCCCGCCA
TTCGCGAGGAGTTGCAGCGCACAACGCAGGAGAAGCCCGCCCCCAATCAGAAGCAGGCGCGCAACGCCGGAAGCGGCGGC
GAACAAAGCATGCTGGCGGAGTTTTCCCGCGATCTGACGCAGGCCGCAGCGGATCAGCAGCTCGATCCCCTCGTCGGGCG
CGATCCTGAGCTGGAGCGCGTCATCCAGATCCTCTGCCGCCGGACGAAGAACAACCCCGTCCTGATCGGCGAACCCGGCG
TCGGCAAAACGGCCATCGTCGAGGGCCTCGCACAGAAGATCGCCGACGGCGATGTTCCCAGCTTTCTCGCCGACAAGCGC
GTGCTCTCTTTGGACCTCTCGCTCATCGTGGCGGGAACGAAGTATCGCGGCCAGTTTGAAGAGCGCCTGAAGACCATCAT
GAAAGAGTTGATGGAAAACCAGAACTGCATCGTCTTCATTGACGAGCTGCATACGCTGGTAGGTGCTGGATCGGCGGAGG
GTTCGCTCGATGCGGCGAACATCCTGAAGCCTGCGCTTTCGCGTGGAGAGATCCAATGCGTTGGAGCGACGACCCCTGCA
GAGTATCGCAAATCGATTGAGAAAGACCGCTCGCTGGAACGGCGCTTCCAGGCCGTCAAGGTGCCGCCTCCCAACGAGGA
AGATGCCATCAAAATCATCATGGGCATCAAGGAGAAGTACGAGAAGTTTCATGCCGTGAGTTACACGGATGAAGCCATTC
TCTTCTCCGTCTCGCACTCGAACCGCTACATTCCCGACCGCTTCCTGCCGGACAAAGCCATCGATCTGATCGACGAGGCT
GGCGCTCGCGTCAAGTTGCGGCAGTCTTCCCTTCCCGAGGAGTTGACCGAGGTCCAGAAGCGTATCAAGTTCATCGTGCA
CCGCATGGAAAACGCCATTGCGAATCACGAGTTCGAAAAGGCGCGTTTCTACTCGGATGAGGAGCGTAAAGAGCGTGAAA
ATTTGCGCGCCCTTCGCGACAAGTACCACCTCGACGATTCGAGCGCGGGCATCGTGACGAAAGAAGACATCGAAGATGTC
GTCTCGCGCTGGACTGGCGTACCGATTACGGCGATCAAGGAAGAAGAGACCGCCAAGCTCATGCGTGTGGAAGAAGAACT
GCATAAGCGTGTGATCTCTCAGGAGAAGGCCATCAGCGCTCTCGCCCGTGCGATCCGCCGCTCGCGTGCAGGTCTCAAGA
ATCCGGCGCGTCCGATTGGCAGCTTCCTGTTCCTCGGGCCTACGGGCGTCGGCAAGACGGAGATGGCACGTACGCTCGCC
CAGTTCCTCTTTGGCAGCGAGAAGAGCCTGATCCGGTTCGATATGTCGGAGTTCATGGAGAAGCACTCGGTCTCCAAGCT
GATCGGTTCGCCTCCGGGCTACGTCGGCTACGAGGAAGGCGGTCAGTTGACGGAGCGCGTGAAGCGTTCGCCGTACTCGA
TCGTTCTGCTCGACGAGATCGAAAAGGCGCATCCGGATGTCTTCAACATTCTGCTGCAGGTCTTTGAAGATGGTCATCTG
ACAGACGGCCTCGGCAACCAGGTCGACTTCAAGAACACGATCATCATCATGACCTCGAATATCGGTGCCAAGCACCTCCA
GAAGCGCGAGGGACTGGGCTTCCAGAGCAGCAAGGAAGACCTGATCCTCGAGAAGATGGAAGAGCTCGTGAAGGGCGAAG
TGAAGCGTACGTTCAATCCGGAGTTCCTCAACCGTATCGACGAGACGATTATCTTCACCTCGCTGTCGGATGGAGATCTG
ATCCAGATCCTCGAACTGCTCGTCCAGCAGTTGAATCAGAACCTTGTGCATAAAGCGATCACGATCTCCGTGACCGACGA
GGCCAAGAAGTGGATTCTGGAGAAGACGCTGGTCGACCGTACCTACGGTGCACGTCCGCTGCGCAGGGCCCTGCAGAAGT
ATGTAGAGGATCCTCTGTCAGAGGCGCTCATCGGAGGTGGCATCAAGGAACGGCCTGCTTTCCTCGAGGTCTACCTGGAT
GTCGACAAGCTTTTCTATCGCCCCATCGTTGGAGAAGGCACGGTAGAAAAAACCGAAGGCGCGGCACTGCAGATCGTCTG
A

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRSHASVESIRKQIEGHTTIREKVSTSVDLPL
SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILQERGLRLPAIREELQRTTQEKPAPNQKQARNAGSGG
EQSMLAEFSRDLTQAAADQQLDPLVGRDPELERVIQILCRRTKNNPVLIGEPGVGKTAIVEGLAQKIADGDVPSFLADKR
VLSLDLSLIVAGTKYRGQFEERLKTIMKELMENQNCIVFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCVGATTPA
EYRKSIEKDRSLERRFQAVKVPPPNEEDAIKIIMGIKEKYEKFHAVSYTDEAILFSVSHSNRYIPDRFLPDKAIDLIDEA
GARVKLRQSSLPEELTEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRALRDKYHLDDSSAGIVTKEDIEDV
VSRWTGVPITAIKEEETAKLMRVEEELHKRVISQEKAISALARAIRRSRAGLKNPARPIGSFLFLGPTGVGKTEMARTLA
QFLFGSEKSLIRFDMSEFMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRSPYSIVLLDEIEKAHPDVFNILLQVFEDGHL
TDGLGNQVDFKNTIIIMTSNIGAKHLQKREGLGFQSSKEDLILEKMEELVKGEVKRTFNPEFLNRIDETIIFTSLSDGDL
IQILELLVQQLNQNLVHKAITISVTDEAKKWILEKTLVDRTYGARPLRRALQKYVEDPLSEALIGGGIKERPAFLEVYLD
VDKLFYRPIVGEGTVEKTEGAALQIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-173 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_0987 YP_004181814.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 2e-141 51
AciPR4_0987 YP_004181814.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 2e-180 50