Gene Information

Name : AciPR4_0573 (AciPR4_0573)
Accession : YP_004181402.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 693367 - 694317 bp
Length : 951 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; KEGG: aba:Acid345_3097 NAD-dependent epimerase/dehydratase

DNA sequence : 
ATGTCTAAGGTTTTGATTACGGGAGTGGCTGGATTCATTGGTTCCAGCATCGCACGAGCTCTGCTCGCTGAAGGCGCGGA
AGTTCGCGGGCTGGACAATTTGAGTACCGGGAAACTCGAAAATATCGAGCAGATTCGCAATGGAATCGATTTTCGCCACG
GTGATGTGCAGGATGCCGTAGCAGTTGCGGACGCATGCAAGGGCGTGGACTACGTCTTTCACGAGGCCGCCATTCCCTCT
GTTCCGGTATCGGTGGCCGATCCCGTAGGAACGAACGGACCCAATCTGATCGGAACGCTGCAGGTTCTGGAAGCCGCGCG
ACAGGCTGGCGTAAAGCGCGTCGTCTACGCTGCATCGTCTGCCGCTTATGGCGACTCGCCGGAGCTACCCAAGCGGGAGG
ATATGGCGCCCGCACCGCTCTCCGCATACGCCGTGCAGAAGCTGACGGGCGAATATTACCTGACGAGCTACGCCAAAATG
TATGGCTTGGAGACGGTCTCCCTGCGCTACTTCAATATCTTTGGACCGCGCCAGGATCCCACGTCGCAGTACTCGGGGGT
ACTCGCCCGTTTTATCTCGCAGATGCTTGCGGGCACCAAACCCACCATCTTTGGCGACGGTTCTACGAGCCGTGACTTTA
CCTACATCGACAACGTGGTGAGCGCGAACCTGCTGGCCGCAAAGTCGGGCTCGCACGTTGCGGGCAAGGTCTTCAACGTG
GCTACCGGGACGTCGGTCACGTTGCTCGAAGCCTACGAAGAGGTACGCCGCATCACGGGATATGCCGGAGACCTGGACTT
CAAGCCCGAGCGGGTAGGCGACATCAAGCACTCCGTCGCGGACATCTCGCTTGCGCGGAAGGAACTCGGATATGGAGTGG
TTGCGGATTTCGCCGCTGGTCTGGAGGAGACGATCGCCTGGTACCGCACGCAAACGGTCGCCGCAGTCTAG

Protein sequence : 
MSKVLITGVAGFIGSSIARALLAEGAEVRGLDNLSTGKLENIEQIRNGIDFRHGDVQDAVAVADACKGVDYVFHEAAIPS
VPVSVADPVGTNGPNLIGTLQVLEAARQAGVKRVVYAASSAAYGDSPELPKREDMAPAPLSAYAVQKLTGEYYLTSYAKM
YGLETVSLRYFNIFGPRQDPTSQYSGVLARFISQMLAGTKPTIFGDGSTSRDFTYIDNVVSANLLAAKSGSHVAGKVFNV
ATGTSVTLLEAYEEVRRITGYAGDLDFKPERVGDIKHSVADISLARKELGYGVVADFAAGLEETIAWYRTQTVAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-53 44
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-53 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_0573 YP_004181402.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 9e-54 44