Gene Information

Name : AciPR4_3951 (AciPR4_3951)
Accession : YP_004184694.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4738460 - 4741069 bp
Length : 2610 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: aca:ACP_2407 ATP-dependent chaperone protein ClpB; SMART: AAA ATPase

DNA sequence :
ATGGCAATCAACTGGGAAAAGATGACAGTAAAATCGCAGGCCGCCCTGCAGGGTGCGGGGCAGCAGGCGACGGAGAACGG
CAATCCGGAGATTCTGCCGCTGCACCTGATGGCGGCGCTGCTGGAAGACCGCGAGGGCATCGTCCTCCCCGTCCTCGAAA
AGATCGGTGTACCGCCGCAACAACTTCTTTCGAATGTGAATGCTGCCATCGAGAAGCTGCCCAAGATCCAGGGAGCGCAG
CAGTCGCCCTCCCTCGGCACCGCGCTGAACAAAGTTTTGGAGCAGGCCTTTAAAGAGGCACAGAACTTCAAGGATGAGTA
CGTCTCCACCGAGCACCTTCTGTTGGCGCTCGCGCAGGGCCGCAATGAACCTGTGCAGCTTGCGCTCGCAGCCGTCGGCG
CGACGCACGATGCGATTCTGCGCGCGCTGACCGCCGTCCGTGGAAACCAGCGCGTCACCGACCAGAATCCCGAAGGCAAG
TTCCAGGCGCTGGAAAAGTACGCGAAGGACGTCACGGCGCAGGCACGCGAAGGCAAGTTGGACCCCGTCATCGGCCGCGA
CGAAGAGATTCGCCGCGTAATCCAGGTGCTCAGCCGCCGCACGAAGAACAATCCCGTGCTCATCGGCGAGCCCGGCGTCG
GCAAGACCGCCATCGTCGAAGGCCTGGCGCGCCGCATCATCTCCGGCGACGTTCCGGATTCGCTCAAGGACAAGCGCGTG
ATCTCGCTCGACCTCGCCTCCATGCTGGCCGGAGCGAAGTTCCGTGGTGAGTTTGAAGAGCGCCTGAAAGCGGTCCTGAA
AGAGATTGAAGACTCGAACGGCGAGATCATCCTCTTCATCGACGAGCTGCATACCCTCGTTGGAGCAGGTGCGGCGGAAG
GCTCCATCGACGCCAGCAACATGTTGAAGCCGATGCTGGCACGCGGCGGTCTACGGGCCATCGGCGCGACGACGCTCAAC
GAGTATCGCAAGTACATCGAAAAGGACGCGGCGCTGGAGCGGCGCTTCCAGGTGGTCTACGTCGGCGAACCCAACGTGGA
AGACACCATCAATATCCTGCGCGGTCTGAAAGAACGCTACGAGGCGCACCACAATGTGCGCATCAAGGACGCAGCCATCG
TTGCGGCGGCGGAGCTTTCGCACCGCTACATCTCGGACCGCTTTCTGCCGGACAAAGCCATCGATCTCGTCGACGAAGCC
GCGGCTTCGCTCGCCATCCAGATCGGCAGTGTGCCGGTAGAGATCGACGCACTCGAACGCCGCGCCACGTCGCTCGAAAT
CGAGCGCACGGCGCTGAAGCGCGAAGAGGATGTGAACTCGCGCGAACGCTTCGCCGTCGTAGAAAAAGAACTGGCCGAAC
TGCAGGAGCAGGCCAGCGGCTTGCGTGCGCGCTGGCAGCGGGAGCGTGATGCGATCACACTTATCGCCGAACTAAAGAAG
AAGATCGAAGCCCTGCGCTTCGAAGCCGAAGATCAGACGCGTCGCGGCAACCTGGAGCGTGCGGCACAGATTCAGTACAG
CGATCTGCCGCGCGCCGAAGCGGAGCTGCGCCAGCTCGAAGCCACGCAGGACGGCTCCGACACCTCGCAGCGCATGCTAA
AGGAGGAGGTCGACGAGGAAGACATCGCCGCCATCGTCTCGCGCTGGACGGGAATTCCGGTCAGCAAGATGCTGGAGGGC
GAGGTGCAGAAGCTGGTGCAGATGGAAGAGCGTCTGCGCGAGCGTGTGGTCGGACAGGACGAAGCTCTCTCCGCCGTGGC
GAACGCGATCCGTCGCAGCCGCGCCGGTCTGAGCGATCCCAAGCGGCCCATCGGCAGCTTCATCTTCCTTGGCCCAACGG
GCGTAGGCAAGACCGAAACCGCACGCGCGCTCGCCGAGTTCCTCTTCGACGACGAGCAGGCGATGGTGCGCATCGACATG
AGCGAGTACATGGAGAAACACGCCGTCGCTCGCCTGATCGGTGCGCCTCCGGGATACGTCGGCTATGACGAAGGCGGACA
GCTCACCGAAGCCATTCGTCGCAGACCATACGCTGTCGTGCTCTTCGACGAGATCGAGAAGGCGCATCCGGATGTATTCA
ACGTGCTGTTGCAGGTGCTCGACGATGGCCGTCTGACGGATTCCAAAGGCCGCACAGTGGACTTCAAGAACACCGTCCTG
ATCATGACGTCGAACACGGGCGCGAGCATTCTCTCGTCCGCGTGGGCGAGTGGTGAAGACGGCTTCGAAGAGGCCAAGGT
GCGCGTGATGGATGAGCTGCGCAAGCAGTTCCGGCCAGAGTTCCTCAACCGCGTGGACGATATCGTGGTCTTCCATCCGC
TGGCCGAGTCTCAACTGACGCACATCATCGACCTGCGCCTGAAGGACCTCGAAAACCTGCTGGCGGACCGTCGCATTACG
CTGGACATGACGCCTGCGGCACGTCACCTGATCTTCAAATCAGGCTACGACCGCGCCTACGGTGCACGTCCGTTGAAGCG
CGCGATCCAGCGCCTGGTGCAGGACCCGCTGGCGATGCGGATTCTCTCAGGCGAGGTGCTGCACGGCGATCACGTGGTGG
TGGATGCGGAGGGCGACAAGCTCGCCTTCCGCGTCGCGGACAGGAAGTAA

Protein sequence :
MAINWEKMTVKSQAALQGAGQQATENGNPEILPLHLMAALLEDREGIVLPVLEKIGVPPQQLLSNVNAAIEKLPKIQGAQ
QSPSLGTALNKVLEQAFKEAQNFKDEYVSTEHLLLALAQGRNEPVQLALAAVGATHDAILRALTAVRGNQRVTDQNPEGK
FQALEKYAKDVTAQAREGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIISGDVPDSLKDKRV
ISLDLASMLAGAKFRGEFEERLKAVLKEIEDSNGEIILFIDELHTLVGAGAAEGSIDASNMLKPMLARGGLRAIGATTLN
EYRKYIEKDAALERRFQVVYVGEPNVEDTINILRGLKERYEAHHNVRIKDAAIVAAAELSHRYISDRFLPDKAIDLVDEA
AASLAIQIGSVPVEIDALERRATSLEIERTALKREEDVNSRERFAVVEKELAELQEQASGLRARWQRERDAITLIAELKK
KIEALRFEAEDQTRRGNLERAAQIQYSDLPRAEAELRQLEATQDGSDTSQRMLKEEVDEEDIAAIVSRWTGIPVSKMLEG
EVQKLVQMEERLRERVVGQDEALSAVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLFDDEQAMVRIDM
SEYMEKHAVARLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVL
IMTSNTGASILSSAWASGEDGFEEAKVRVMDELRKQFRPEFLNRVDDIVVFHPLAESQLTHIIDLRLKDLENLLADRRIT
LDMTPAARHLIFKSGYDRAYGARPLKRAIQRLVQDPLAMRILSGEVLHGDHVVVDAEGDKLAFRVADRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-121 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-113 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-113 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_3951 YP_004184694.1 ATP-dependent chaperone ClpB VFG0079 Protein 4e-155 44
AciPR4_3951 YP_004184694.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-116 43