Gene Information

Name : AciPR4_3039 (AciPR4_3039)
Accession : YP_004183792.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 3745802 - 3747436 bp
Length : 1635 bp
Strand : -
Note : KEGG: aca:ACP_3110 type 4 fimbrial assembly protein; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCACAAGCACCGCTGGCAATCCCAATTCCGCACCCCGAGCTTGGCGAGATAGAGCGCGCGCATCTTCTGGCGAAGCG
TTATCGCTGCGAGTACGTCGACCTGCAAAACTTCAAGATCCAGCATGAGCTCTTCAAGGCCGTGCCCGTGGAACTGATGT
TCCGCTACAACTTCGTCCCGCTGGAGCAGCACGAGGGACGACTGATCATCGCGGTCAGCGATCCGTCGAAGCTGATGGTG
CTCGACGAGATCTCCGGCCTGCTGGGACAGCGACTGGTCACGCGCGTCGCCACGCTCTCGCAGATCAATGAGCTTCTGAA
GAAGACGGAACAGTCGCAGCGCGTTCTTGAGGAAGCCACGGAGGGATTGACCTTCGACGTTCTCTCCTCCGACGACAATC
CGGACGAGAACATCTCCATCGAGCGGCTGACCAGCGAAGACGATATCTCGCCGATCATCCGTCTGGTGGATACCACGATC
TTCTCCGCGCTCGAACGCCGCGCTTCGGACGTGCATATTGAGACCTACGACGACTCGTTGCTGGTAAAGTACCGCATCGA
TGGCGTACTGCAACTCGCCATGGCGCCGATTGCTCGCGAGCATCACCAGACGATTCTTTCGCGTATTAAGGTCATGTCTG
AGCTGGACATCGCCGAACGCCGCGTTCCGCAGGACGGACGTTTCCGCGTGCGCTACAAGGGCCGCCTGATCGATTTCCGT
GTCTCCATCATGCCCACGGTGCATGGTGAAAACGCCGTGCTCCGCGTACTCGATAAAGAGTCGATGTCGGAGAAGTTCAA
GAAGCTTTCGCTCGATGTCGTGGGCTTTGGCGAAGAGGACCTCGCCCGTTTTCGCCGCTATATTAAAGAGCCGTACGGCA
TGGTGCTGGTGACCGGACCGACTGGTTCCGGCAAGACGACGACGCTCTATGCCGCGCTCAACGAGATCAAGAGCGAAGAA
GACAAGATCATCACCATCGAAGACCCAGTGGAGTACCAGATCCGCGGCATCACGCAGATTCCGGTCAACGAGAAGAAAGG
TCTTACCTTCGCTCGCGGTTTGCGCTCCATCCTGCGCCATGACCCGGACAAGATCCTGGTCGGTGAGATCCGTGACGCGG
AGACGGCGCAGATCGCCATCAACTCCGCACTGACGGGCCATCTTGTCTTCACGACGGTCCATGCAAATAACGTGGTCGAT
GTGTTGGGTCGCTTTCTGAACATGGGCGTCGAGCCATATAACTTCGTCTCTGCACTGAACTGCATCCTGGCCCAGCGGCT
GGTGCGTCAGAACTGCGACTTCTGTTCTGTGCTGGTGGAGTACAACGACGAGCAGCTCGTCGAGAGCGGCCTGAATCCTG
AAGAGTGGAAGGACTTCAAGTTCAGAGAGGGCACCGGCTGCATCGAATGCGGCGGCACGGGCTATCGTGGCCGATCAGCG
ATCCACGAGCTGCTGGAGCTCGACGATGAGATTCGCGATATGCTTCTGGAGAAACGTCCGGGGTCTGAGATCCGAAGGAA
GGCACGCGAGAAGGGCATGAGCTTCCTGCGCGACTCCGCTCTGCAACGTGTCCGTGCCGGGATTACGACGCTCCGAGAGA
TTAACAAAGTCACCTTCATCGAGGCCATGCGCTAG

Protein sequence :
MAQAPLAIPIPHPELGEIERAHLLAKRYRCEYVDLQNFKIQHELFKAVPVELMFRYNFVPLEQHEGRLIIAVSDPSKLMV
LDEISGLLGQRLVTRVATLSQINELLKKTEQSQRVLEEATEGLTFDVLSSDDNPDENISIERLTSEDDISPIIRLVDTTI
FSALERRASDVHIETYDDSLLVKYRIDGVLQLAMAPIAREHHQTILSRIKVMSELDIAERRVPQDGRFRVRYKGRLIDFR
VSIMPTVHGENAVLRVLDKESMSEKFKKLSLDVVGFGEEDLARFRRYIKEPYGMVLVTGPTGSGKTTTLYAALNEIKSEE
DKIITIEDPVEYQIRGITQIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDAETAQIAINSALTGHLVFTTVHANNVVD
VLGRFLNMGVEPYNFVSALNCILAQRLVRQNCDFCSVLVEYNDEQLVESGLNPEEWKDFKFREGTGCIECGGTGYRGRSA
IHELLELDDEIRDMLLEKRPGSEIRRKAREKGMSFLRDSALQRVRAGITTLREINKVTFIEAMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 4e-73 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-73 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_3039 YP_004183792.1 type II secretion system protein E VFG2426 Protein 3e-70 44
AciPR4_3039 YP_004183792.1 type II secretion system protein E VFG2048 Protein 2e-73 43
AciPR4_3039 YP_004183792.1 type II secretion system protein E VFG1876 Protein 2e-73 43
AciPR4_3039 YP_004183792.1 type II secretion system protein E VFG0182 Protein 6e-74 43