Gene Information

Name : AciPR4_2870 (AciPR4_2870)
Accession : YP_004183631.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3572304 - 3572978 bp
Length : 675 bp
Strand : -
Note : KEGG: aba:Acid345_3099 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGACTCTTGCTGGTTGAGGACGAACTGGAGATTCAAGGCTTCGTCAAACAATCGTTGATTGATGCTGGGTGGGACGT
GCAAACGGCTGACGATGCTACTTCGGCACTCGAGGAGGTGACGAAGCACGTCTTTGATGCCTTGATCATCGACCTTGGCC
TACCTGACCTTGACGGAATCGACCTCATTCTGCGGCTTCGCAGATCAGGGATTAAGGCCCCTGTACTTATCCTTTCTGCG
CGACGCTCGGTCGACGAACGCGTGAAGGGTCTCGAACTGGGTGGGGATGATTACCTTACAAAGCCGTTTGCCGCCGCTGA
GCTCGTCGCTCGCATCCGCAATCTAGTTCGATTGGCATCGCAAAAGGAAAACATCAGCCATATTCGGATTCATGATCTGG
AGATCGATGCCGTCAAACGTAGGGCGACTCGGAACGGGCAACTGCTAAACCTAACCCCGCAAGAGTTCTTACTGCTCGAA
TATCTCTGCCGCAACGCTGGTCGAGTGGTTACACGTTCAATGCTGCTTGCCGAGGTTTGGGGTATGCAGTTTCAACCCGA
CACGAACATGGTCGACGTCCATATGTATCGGCTCCGCGGAAAAATTGATCCTGAAGGTTCGGAGTCACGCATCAAGACTC
TACGAGGTGTTGGGTATGTCTTCCAGACGCACTAG

Protein sequence : 
MRLLLVEDELEIQGFVKQSLIDAGWDVQTADDATSALEEVTKHVFDALIIDLGLPDLDGIDLILRLRRSGIKAPVLILSA
RRSVDERVKGLELGGDDYLTKPFAAAELVARIRNLVRLASQKENISHIRIHDLEIDAVKRRATRNGQLLNLTPQEFLLLE
YLCRNAGRVVTRSMLLAEVWGMQFQPDTNMVDVHMYRLRGKIDPEGSESRIKTLRGVGYVFQTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-35 45
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-33 43
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-31 43
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0638 Protein 7e-31 43
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0125 Protein 1e-30 42
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0308 Protein 3e-31 42
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator BAC0347 Protein 9e-30 41
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator VFG0596 Protein 5e-29 42
AciPR4_2870 YP_004183631.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-28 42