Gene Information

Name : AciPR4_2224 (AciPR4_2224)
Accession : YP_004183020.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2689470 - 2690144 bp
Length : 675 bp
Strand : -
Note : KEGG: aca:ACP_1259 TcrA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGAAACTTTTGATCATCGAAGACGATCGACGTATCGCGAACCTGCTCCAGCAGGGACTCTCCGAAGATGGTCACAGCGT
CTTTGTCTCCCATCGCGGCGACGATGGTCTTGAACTGATCCAAAGCCAATACTTCGACATGGTCGTGCTGGACATTATGC
TGCCCGGCCGCGACGGCTTCAGCATTCTCAAGCAGGCGCGTCACGCTCGATATGCAATGCCTATCCTGATTCTCACGGCC
AGGGACGGCATGGCCGATATCGTTCGAGGCCTCGATCTGGGGGCAGACGACTATCTCACCAAGCCGTTCCAGCTTGAGAT
TCTTTTGGCGCGTGTCCGCGCGATGGGCCGCCGCGGTCAGGTGCCGCTTCTGGATCAGCTGCGCGTGGGCGATCTCATCC
TCGATCGAAGTCAGAAACTCCTTCTCCGGGGGGATCTGGAGATTCCGTTGACCCGCAAGGAATTTGTTCTGCTGGAACTC
CTGATGCGTAGACCGCAACAGGTAATCTCACGGAATGAGTTGATCGAAGTAGGCTGGGGATATGATGCCGAAGTGAGCGA
CAATAGCGTCGACTTCTACATCCACAGTCTCCGTTCGAAGATCAATGTGGACGGCCAGCCCAGCATGATCCGCACCGTGC
GCGCGCAGGGATACGCGCTCAGCGCCGCATCATGA

Protein sequence : 
MKLLIIEDDRRIANLLQQGLSEDGHSVFVSHRGDDGLELIQSQYFDMVVLDIMLPGRDGFSILKQARHARYAMPILILTA
RDGMADIVRGLDLGADDYLTKPFQLEILLARVRAMGRRGQVPLLDQLRVGDLILDRSQKLLLRGDLEIPLTRKEFVLLEL
LMRRPQQVISRNELIEVGWGYDAEVSDNSVDFYIHSLRSKINVDGQPSMIRTVRAQGYALSAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-37 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator BAC0125 Protein 7e-40 43
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-37 43
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator BAC0197 Protein 5e-38 42
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator BAC0347 Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-40 43
AciPR4_2224 YP_004183020.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-37 41