Gene Information

Name : AciPR4_1815 (AciPR4_1815)
Accession : YP_004182615.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2194406 - 2195710 bp
Length : 1305 bp
Strand : +
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: aca:ACP_0240 flagellar protein export ATPase FliI; SMART: AAA ATPase

DNA sequence :
GTGCCGCTCGCCTCCTACTTCAACCGTCTGCAGCAACTACCGTCCGCACGGTGGTATGGCAGGGTGGTGGAGGCAACTGC
ACAGACCATCTCTTCCGATGGTCCGTCCTGTTCTGTAGGAGAGGCGTGCGAGATTGTCGATAGTAAAGGTGGGTACCACG
CCGCCGAGGTGATCGGATTTCGTGGATCGCACCTCATCTCCATGCCGCTGTCGAGCTCCAGAGGCATTCGCTTTGGAGAT
CGTGTGATGACGACTGGAGAAGTTCCTTCTCTCGGCGTTGGCGAAGATTGTCTCGGACGCGTATTGGATGCCAGGGGCCG
GCCTATCGATGAACGGCAAGCACCACGCGTCGAAACGTTTCGTCCGCTGGATGGCGATCTTCCTATGGCGATGCACCGGG
TCCCGATTCAAACGCCTTTAGCCACCGGCGTCCGTGTGCTGGACGCCATGATGACGGTCGGGCGAGGCCAACGCGTCGGC
ATCTTCGGCGGATCGGGTGTGGGTAAGAGCACCCTGATCGGCATGATGACGCGGAATACTTCGGCGGACCTTACCATTGT
GGGCTTGGTGGGCGAACGCGGCCGCGAGGTGCGCGAGTTTCTTGAAGACTCTCTCGGTGAGAAAGGGCGGCGGCGTTCGG
TGACGGTGGTTTCTACCTCGGACGAGTCGCCGCTGATGCGTATGAGGGCTGCGCTCGCAGCAACGACGTTAGCTGAGTCT
TATGCTGCCAAGGGAAAGCACGTTCTCCTCGTTTTGGATTCGCTCACACGCTATGCCATGGCAGCGCGCGAGGTCGGTCT
GGCAGCGGGAGAACCGGCAGCGACCAAAGGGTACACTCCCTCTGTCTTTGCAAAGATGGCCCGTCTAGTCGAACGCGCTG
GGAACTTCGGAACCGGAAGTATGACAGCGTTCTATACCGTTTTGATGGAGGGAGACGATCAGCAGGACCCTCTCGTGGAC
GCCGCTCGCTCGCTCCTCGACGGACATATCGTGCTCTCGCGCGAGATGGCGTCCGCCGGGATCTATCCTCCAGTGCATGT
GCTCGACTCGCTCAGCCGCCTGATGCCGGCCGTGATCTCCGCCGAGCATCGCCAGGATGCCGCGAAGATCCGCCGCACCA
TGGCGACGTATGCACGCTCCGAAGACATGGTACGGCTGGGAATGTACAAGAGCGGGATGGATGCAGAGCTTGATCACGCC
ATTCGCATGCATCCGCGCATTCAGACTTTCTTTCAGCAGACGTCCGAAGAACGTGCGGACTACGCTTCTACTCTCGCTGC
ATTGCATGGTTTGGAAATGGCTTGA

Protein sequence :
MPLASYFNRLQQLPSARWYGRVVEATAQTISSDGPSCSVGEACEIVDSKGGYHAAEVIGFRGSHLISMPLSSSRGIRFGD
RVMTTGEVPSLGVGEDCLGRVLDARGRPIDERQAPRVETFRPLDGDLPMAMHRVPIQTPLATGVRVLDAMMTVGRGQRVG
IFGGSGVGKSTLIGMMTRNTSADLTIVGLVGERGREVREFLEDSLGEKGRRRSVTVVSTSDESPLMRMRAALAATTLAES
YAAKGKHVLLVLDSLTRYAMAAREVGLAAGEPAATKGYTPSVFAKMARLVERAGNFGTGSMTAFYTVLMEGDDQQDPLVD
AARSLLDGHIVLSREMASAGIYPPVHVLDSLSRLMPAVISAEHRQDAAKIRRTMATYARSEDMVRLGMYKSGMDAELDHA
IRMHPRIQTFFQQTSEERADYASTLAALHGLEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-75 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-75 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-77 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-76 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-76 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-73 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-80 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-79 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-79 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-81 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-81 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-80 45
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-75 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-70 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 9e-71 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-66 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-66 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-80 44
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-80 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-70 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 9e-71 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-66 43
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-67 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-60 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-68 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-69 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-70 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-65 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-65 42
escN AAK26715.1 EscN Virulence LEE Protein 3e-67 42
escN AAL57542.1 EscN Virulence LEE Protein 3e-67 42
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-67 42
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-67 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-67 42
escN AAC38383.1 EscN Virulence LEE Protein 8e-68 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-67 42
escN AAC31513.1 L0034 Virulence LEE Protein 6e-68 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 7e-68 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-68 42
ECs4568 NP_312595.1 EscN Virulence LEE Protein 7e-68 42
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-65 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-69 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG1254 Protein 1e-86 50
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG2499 Protein 2e-84 50
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0515 Protein 4e-77 49
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG2331 Protein 7e-85 47
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0048 Protein 7e-82 47
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG2144 Protein 5e-79 45
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0390 Protein 7e-77 45
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0192 Protein 3e-79 45
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0812 Protein 3e-68 42
AciPR4_1815 YP_004182615.1 FliI/YscN family ATPase VFG0730 Protein 4e-68 42