Gene Information

Name : AciPR4_1089 (AciPR4_1089)
Accession : YP_004181914.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1296913 - 1299576 bp
Length : 2664 bp
Strand : +
Note : TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: sus:Acid_0239 ATPase; SMART: AAA ATPase

DNA sequence :
ATGGTACTGAGTCTGAAATCGCTGGTAGCAAAATTTGATGGAAGTACGCGGGATGCAATGGAGGGCGCTGCGGGCCTCTG
TGTTTCGGGCACACATTACCAGGTTGAGATTGAACATTTTCTCGTCAAGGCGCTTGAGCAGAAAGACGCGGATCTGCACT
ATATCTTCCGCCATTTTGAGGTTGACTCGTCAAAGCTCGTAGTAGAACTGCGAAAGAGTCTGGATCGACTGAAAACAGGG
AACACGCGTGGACCTTCCTTCAGTCCGATGCTGGTCACCATGTTTTCTGAGGCGTGGTCCATCGCCACGTTGAATTACGC
AGACACACGTATTCGCACAGGCCACGTACTCTTAGCGCTGCTGGCGAATGACGAAATGTTGCGATTGCTGCGAGAGATCA
GCCGCGAGATGAAGAAGATCTCACTCGAAGTATTGAGCGAGCAATTTGAGGAGATCACGACGTCCTCAATCGAGATTCCG
GCGGAGGTGCCTGTCGAATCGGGTAGTAACGGGTCCAAGATTCCAAGGGTAACCTCTGCTACGCCGTTTTTGCAGCAGTA
CACCACGAATCTCACGCAGAATGCGCGAGAGGGCAAACTCGATGCGGTCATCGGGCGTAACGCAGAAATCCGCCAGATGA
TCGATGTCCTGATGCGCAAGCGACAGAACAATCCGATTCTGACTGGCGAGGCCGGTGTGGGAAAGACCGCAGTCGTAGAG
GGACTGGCCGCGCGCATTGCTGCTGGCGAAGTTCCACCCGCGTTGCAGAACGTGCAGCTTCACGCGCTGGACCTTGCACT
GCTGCACGCAGGCGCCGGAGTCAAGGGTGAGTTTGAAAATCGGTTGAAGGGCTTGATTCAGGAGGTGAAGTCCTCTCCAC
AACCGGTGATCCTCTTCATTGACGAAGCGCACACCATGATCGGGGCTGGCGGGCCCGCAGGACAGGGAGACGCAGCTAAT
TTGTTGAAGCCGGCTCTGGCGCGCGGCGAACTGCGCACGATCGCCGCCACCACATGGTCGGAGTACAAACGCTACTTTGA
AAAAGATGCAGCACTGGCTCGGCGATTCCAGGTGGTTCACGTTCAAGAGCCTTCGGAGGAACGCTGTGTTGCCATGTTGC
GCGGTCTCTTGCCCGCGCTCGAACTGCATCACGGCGTCCGGATCATGGACGATGCTTTGATTGCGGCGGTCCGTCTCTCG
CATCGCTATATGCCTGGTCGTCAGTTACCGGACAAGGCCGTCAGTGTGCTTGATACCGCGTGCGCACGAGTGGGTCTGAG
CCTGAGCGCCGCACCCTCGGCACTGGAAGAAATCATGCATCGCATCGCGACTCTGGAATCGCAAGAACGCGTGCTACTCA
GGGAGCAGGCTACCGGAAGTTCACACAAGGATGCGCTGTTGGAGATCACAACTTCGTTGGAAGGCGCAAAGGGCGAACTT
CGAGAAATGCAGGCAAGGTGGGCGGAGGAGCGCGACATCGTTGACCACCTGCATGTGCTTCGGGCCAAACTGGAAGGAAC
AGAGATCGAGGCGACCCTGCGGGAAACAACATTGCGCGAGCTTGCTACGGCCAAAATCGAACTCTTCGATCTGCAGCAGG
GAAAACCCTTGACCTATGTTGGTGTAGATCAGCAGATCGTTGGCGAGGTCATCTCGGAGTGGACTGGTATTCCGCTCGGT
AAGATGCTTGCAGACGAAGTGTCGCGCATCCTCGACCTCGAAGACAGTCTGAAGAAGCGTGTCATCGGCCAGGATCATGC
GATGAAAGCCATCGCTCAGCGGGTTCAGACGTCGCGAGCCAACCTTGACGATCCATCCAAACCGATCGGAGTTTTTCTGC
TTGCCGGACCAAGCGGTGTTGGCAAGACGGAGACAGCCCTGGCTCTTACCGATCTACTCTATGGCGGCGAGCAAAATCTG
ATCACGATCAATATGTCGGAGTTTCACGAACCACATTCGGTATCGACGCTTAAGGGAGCACCTCCCGGCTACGTGGGATA
CGGCGAGGGAGGAGTACTCACCGAGGCGGTGAGAAGGCAACCGTATTCGGTCGTGCTGCTTGACGAAGCGGAAAAGGCGC
ACCCCGAGGTGCTGGAGCTGTTCTTCCAGGTCTTTGACAAGGGATACATGGAGGACGGGGAAGGGCGAGGCATCGACTTC
CGCAACACGCTTATTCTGCTCACGACCAACACGGCAAGCGGAATAATCTCCAAACTTGCCGAGGATCCCCATGCGCTGCC
AGCCCCCTTGGCGTTGGCTTCTGCGATCCGGCCGGAGCTGAACCGCGTCTTCAAACCTGCGTTGTTGGGACGCATGCTCG
TCGTGCCCTATTACCCGGTGCAGGACGAAGTACTTGAGCGGATCATCCGATTGAAACTCAACAAAATTCAAGCGCGGCTC
ATGGCAAATCACCATATTGCATTGGACTATGACGAATCGCTTCTCACGTTGATCCGGCAGCGTTGTATGGAGGTCGAAAC
CGGCGCGCGCAATGTGGATCACCTTATTTCCAACACGATTCTGCCCGAGATTTCAAAACAGCTTCTGGAGCGCATGGCTG
AAGAAGACCTGCTTGAGAGTATTTGGCTCGGGGTTTCAGAGAACGGAGCCATCCGCTACGAATGGACGATTTTGGAGTCA
GACGAGTTGGTTTCGCAAGCCTGA

Protein sequence :
MVLSLKSLVAKFDGSTRDAMEGAAGLCVSGTHYQVEIEHFLVKALEQKDADLHYIFRHFEVDSSKLVVELRKSLDRLKTG
NTRGPSFSPMLVTMFSEAWSIATLNYADTRIRTGHVLLALLANDEMLRLLREISREMKKISLEVLSEQFEEITTSSIEIP
AEVPVESGSNGSKIPRVTSATPFLQQYTTNLTQNAREGKLDAVIGRNAEIRQMIDVLMRKRQNNPILTGEAGVGKTAVVE
GLAARIAAGEVPPALQNVQLHALDLALLHAGAGVKGEFENRLKGLIQEVKSSPQPVILFIDEAHTMIGAGGPAGQGDAAN
LLKPALARGELRTIAATTWSEYKRYFEKDAALARRFQVVHVQEPSEERCVAMLRGLLPALELHHGVRIMDDALIAAVRLS
HRYMPGRQLPDKAVSVLDTACARVGLSLSAAPSALEEIMHRIATLESQERVLLREQATGSSHKDALLEITTSLEGAKGEL
REMQARWAEERDIVDHLHVLRAKLEGTEIEATLRETTLRELATAKIELFDLQQGKPLTYVGVDQQIVGEVISEWTGIPLG
KMLADEVSRILDLEDSLKKRVIGQDHAMKAIAQRVQTSRANLDDPSKPIGVFLLAGPSGVGKTETALALTDLLYGGEQNL
ITINMSEFHEPHSVSTLKGAPPGYVGYGEGGVLTEAVRRQPYSVVLLDEAEKAHPEVLELFFQVFDKGYMEDGEGRGIDF
RNTLILLTTNTASGIISKLAEDPHALPAPLALASAIRPELNRVFKPALLGRMLVVPYYPVQDEVLERIIRLKLNKIQARL
MANHHIALDYDESLLTLIRQRCMEVETGARNVDHLISNTILPEISKQLLERMAEEDLLESIWLGVSENGAIRYEWTILES
DELVSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-161 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_1089 YP_004181914.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 0.0 50
AciPR4_1089 YP_004181914.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 2e-140 43