Gene Information

Name : AciPR4_0105 (AciPR4_0105)
Accession : YP_004180940.1
Strain : Terriglobus saanensis SP1PR4
Genome accession: NC_014963
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 100580 - 101530 bp
Length : 951 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; KEGG: aca:ACP_1490 exopolysaccharide biosynthesis protein

DNA sequence : 
ATGCAAAAAGTTCTGATTACTGGAGCCGCGGGCTTCATCGGCTCCCATCTTGTAGACGCGCTGGTGCAGCGCGGCGATCT
TGAAGTCCGTGGGTTGGATAACCTCGTCACCGGGCAGCGTTCGAATCTCGACACAAGCTGGAAAGAGATTGATTTTTACC
AGATCGATCTCAACGATGCGGAGGGTCTTCGCGAGGCGGTCGCTGGCGTCGATACGATCTTTCATGAGGCGGCGCTTCCC
AGCGTTCCGCGTTCGGTGCAGGACCCGCGCACCTCGCATATTGCCAATGTCGAAGGCACGTTCAATCTTCTGGAAGCCGC
GCGGGCTGCGGGTGTTCGTCGCATTGTGTATGCGGCCTCTTCTTCTGCGTACGGAGATCAGCCTGGGTTTCCGCGCGTCG
AGACGATGCGGCCGGAGCCGATATCGCCTTATGCCGTGCAGAAGCTTACGGCGGAGCTTTATCTGCAGAGTTACTTCCGC
GTCTATGGTATGGAGACGGTGTGCCTGCGCTACTTCAATATCTTCGGGCCGCGGCAGGCGGCGGACTCGCCTTACTCCGG
CGTGATGGCGAAGTGGATCACGACGCTCCTTGAAGGTGGGACGCCTCGGATCAACGGTGATGGAGAGCAGGGAAGGGATT
TCACCTACGTTGCCAACGTGGTGCATGCCAATCTTTTGGCGGCAGAAACGCCAAAAGACGCCATTGCCGGAAGGGTTTTC
AACATTGCCTGCGGGGAACGACACACTTTAAACGCAACCTACGCGCTTATGGCGCGTCTCTTGAACAGCAGCACAAAACC
GGAACACGGACCTGAACGCGCAGGGGACGTGAAAGACTCGCTCGCCAGTATCGAAGCCTCACGTGAGGCCTTTGGATATA
GCGTCGTGGTCGATTTCGAAGAGGGGCTGCGGAGGACCGTCGAGTGGTATCAGCAACAGTACAAAAAATAA

Protein sequence : 
MQKVLITGAAGFIGSHLVDALVQRGDLEVRGLDNLVTGQRSNLDTSWKEIDFYQIDLNDAEGLREAVAGVDTIFHEAALP
SVPRSVQDPRTSHIANVEGTFNLLEAARAAGVRRIVYAASSSAYGDQPGFPRVETMRPEPISPYAVQKLTAELYLQSYFR
VYGMETVCLRYFNIFGPRQAADSPYSGVMAKWITTLLEGGTPRINGDGEQGRDFTYVANVVHANLLAAETPKDAIAGRVF
NIACGERHTLNATYALMARLLNSSTKPEHGPERAGDVKDSLASIEASREAFGYSVVVDFEEGLRRTVEWYQQQYKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 5e-47 43
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 5e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AciPR4_0105 YP_004180940.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 2e-47 43