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Name : Isop_0880 (Isop_0880) Accession : YP_004178019.1 Strain : Isosphaera pallida ATCC 43644 Genome accession: NC_014962 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1236984 - 1238414 bp Length : 1431 bp Strand : - Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: psl:Psta_1377 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PF DNA sequence : ATGAACGCCTCCCTTGAACCGTCCACCCACGCCACCACGCCAGCTTACTCCCCCTTGTCGCCGCCATTGCCCCGGTTCCG TTACGCCGGCCCAACCGGCATGACCCAGCTGCAGGCGGCCCGTGCGGGAACGATCACCCCCGAAATGGAATACGTGGCAG CCCGCGAGGGATTGCCTCCCGAACTCATCCGCGCCGAGGTGGCCCGGGGCCGCATGGTCATCCCCGCCAATGTCAACCAC TTGAAACTCGGCTTGCAACCCATGGCGATTGGATTGGCCGCCCGCTGCAAAATCAACGCCAACATCGGCAACTCAGCCGT CACATCCGAGGTCGAGAACGAACTAGCCAAGCTTCGCGCCGCGATCGAACTTGGGGCCGACACGGTGATGGATCTGTCCA CCGGCGCGGGGATTGACGAGATCCGCCAGGCGATCCTCGCCGCCAGTCCCGTCCCCATCGGCACGGTGCCGTTGTATCAA GCGGTGCAGCAAGTCAAAAAGGTCGAAGACCTCAAACCTCAAGACTTCCTCGACATCGTGGAACACCAAGCCAAGCAGGG GGTCGATTACATGACCCTTCACGCTGGCATCCTTCGCGACATGATCCCCCTCACGGCCGGGCGGGTCACCGGCATCGTCT CGCGGGGCGGCTCGCTCATCGCTAAGTGGATGGTCGCGCACAAGGCTGAGAATCCCCTTTATACTCAGTTTGACCAACTC TGCGAAATCATGCGGGCCTACGACGTGACCTGGAGCCTGGGCGACAGCCTGCGGCCCGGCTCGATCGCCGACGCCTCCGA CAAAGCTCAGTTCGCCGAACTCAAGGTCCTGGGCCAACTAACCCGACGCGCTAAGGCGCTGGGGTGCCAAGTCATGGTCG AAGGGCCGGGCCATGTGCCAATGGATCAAATCCCGGTCAACATGGAAAAACAGGCGTTCGAGTGCGAAGAAGCACCTTTC TATGTGCTAGGACCGCTCGTCACTGACATCGCCCCCGGCTACGACCATATTACCTCGGCGATCGGCGCGGCCATCGCCGG TTGGTATGGTGCGTCGATGCTCTGTTACGTCACCCCCAAAGAACACCTCGGTTTGCCTGAAGTCGATGATGTTCGCCAAG GAGTGATCGCCTACAAGATCGCCGCCCACGCCGCCGACCTCGCCCGCAAGCGTCCAGGCGCGCGCGACCGCGACGACGCC CTGTCCCACGCTCGCTACACCTTCGACTGGCGGCGTCAGTTCGCCCTTGCACTCGACCCTCAAACCGCTCAACGGATGCA CGACGAAACCTTGCCACAAGAAGCGTTCAAGTCGGCTGCGTTTTGCTCGATGTGCGGTCCCAAGTTTTGTTCAATGAAGA TCACCGAAGATGTTCGTCGACTCGTCGAAGTTGAGATCCAGGCCAAAGACCAACCCGTGACCGTCGGATGA Protein sequence : MNASLEPSTHATTPAYSPLSPPLPRFRYAGPTGMTQLQAARAGTITPEMEYVAAREGLPPELIRAEVARGRMVIPANVNH LKLGLQPMAIGLAARCKINANIGNSAVTSEVENELAKLRAAIELGADTVMDLSTGAGIDEIRQAILAASPVPIGTVPLYQ AVQQVKKVEDLKPQDFLDIVEHQAKQGVDYMTLHAGILRDMIPLTAGRVTGIVSRGGSLIAKWMVAHKAENPLYTQFDQL CEIMRAYDVTWSLGDSLRPGSIADASDKAQFAELKVLGQLTRRAKALGCQVMVEGPGHVPMDQIPVNMEKQAFECEEAPF YVLGPLVTDIAPGYDHITSAIGAAIAGWYGASMLCYVTPKEHLGLPEVDDVRQGVIAYKIAAHAADLARKRPGARDRDDA LSHARYTFDWRRQFALALDPQTAQRMHDETLPQEAFKSAAFCSMCGPKFCSMKITEDVRRLVEVEIQAKDQPVTVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-121 | 60 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-121 | 60 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-117 | 57 |
