Gene Information

Name : Isop_0061 (Isop_0061)
Accession : YP_004177207.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 87189 - 88601 bp
Length : 1413 bp
Strand : -
Note : COGs: COG0174 Glutamine synthetase; InterPro IPR004809: IPR008147: IPR008146; KEGG: psl:Psta_1754 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine sy

DNA sequence : 
ATGACCCCCCGCGAAGTGTTGGCGTTGATCCGCAGCAAGGAGGCCCAGACCGTTGATCTCCGCTTCATGGATTTCCCCGG
CGTCTGGCAGCATTTCGCCATCCCCGCCGACCGGCTCACCGAGGAAACCTTCGAGGAGGGGATCGGCTTCGACGGCTCCA
GCGTGGCCGGTTGGCGTCAAATCAACGAGGCTGACCTGTTGGTGGTCCCGCAACCCGAAACCGCCCTGATCGACCCGTTC
GCTGCTCGCCCCACCCTCATGATGATCTGTAATATCCAAGACCCACTCACGAAACAGGACTACACCCGCGACCCCCGCAA
CATCGCCCGCAAAGCGCTGGGGCATCTCCGCTCCACCGGCGTAGCCGACCAAGCCCGAATCGCTACAGAAATTGAATTTT
TCATCTTTGATGACGTACGGTTCGACCAGCATGGTCATCAGGCATTCCATCTGGTTGATTCGATTGAAGGCGACTGGAAC
ACCGGACGTGATGAGCGTCCCAATCTCGGCTCCAAGCCGCGTTCCCCCCTAGGCTACTTCCCCTGCCCGCCCACCGACAC
CCTAGCCGACCTCCGCGCTGAAATGGTGGGGATTCTCGCCGAATGCGGCGTCCGGGTCACCGCCCACTTTCACGAGGCGG
CCACCGGTGGCCAGTGCGAAATCGACCTGGATTGGGCCGATCTGGTCCAAGCGGCCGACCAAGTCATGCTCGCCCGATAC
GTCATCCGCAGCGTCGCGCGTCGCCACGGCAAAACCGCCACCTTCATGCCCAAACCGCTCTTCGGCGACAACGGCTCGGG
CCTCCACACCCACCTCGCCATGCGCAAGGAGGGCGAGTCGATCCTGCCCGGTCACGGCTACGCCGGTCTCTCCGACACCG
CCTTGTACATGATCGGCGGCATCCTCAAACATGCCAACGCCCTTTGTGCCTTCGCTAACCCGACAACCAACAGCTACAAA
CGTCTGGTGCCCGGCTTCGAAGCCCCGACCCGGATCGGCTACTCCCGGCGCAACCGGGAGGCGATCGTGCGGGTTCCCAT
CCACAGTTTCTCGCCGCACGCCCAGTCGATCGAATACCGCGCCCCCGACGCCGCGGCCAACCCCTACTTACTTTTCTCCG
CCCTGGTTATGGCAGCGCTCGACGGCGTCCAAACCAAGTCGGCCCCCGGCGAACCTTACGACCGCGACCTCTACGACCTC
GACCCACAAATCAACGACCGCCAACCCACCCTGCCCCTGACCCTCAAGGATTCGCTCGAAGCCCTGCAACGCGATCAAGA
GTTCCTACTGAGAGGCGACGTCTTCACCCCCGACGTGTTGGACACCTGGATTTGGTACAAACGCACTCACGAATCCGAAG
CCGTCCGGGTTCGCCCCCACCCCTACGAGTTCGTCCTCTACTACGACGTCTGA

Protein sequence : 
MTPREVLALIRSKEAQTVDLRFMDFPGVWQHFAIPADRLTEETFEEGIGFDGSSVAGWRQINEADLLVVPQPETALIDPF
AARPTLMMICNIQDPLTKQDYTRDPRNIARKALGHLRSTGVADQARIATEIEFFIFDDVRFDQHGHQAFHLVDSIEGDWN
TGRDERPNLGSKPRSPLGYFPCPPTDTLADLRAEMVGILAECGVRVTAHFHEAATGGQCEIDLDWADLVQAADQVMLARY
VIRSVARRHGKTATFMPKPLFGDNGSGLHTHLAMRKEGESILPGHGYAGLSDTALYMIGGILKHANALCAFANPTTNSYK
RLVPGFEAPTRIGYSRRNREAIVRVPIHSFSPHAQSIEYRAPDAAANPYLLFSALVMAALDGVQTKSAPGEPYDRDLYDL
DPQINDRQPTLPLTLKDSLEALQRDQEFLLRGDVFTPDVLDTWIWYKRTHESEAVRVRPHPYEFVLYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-89 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Isop_0061 YP_004177207.1 L-glutamine synthetase VFG1399 Protein 1e-111 50