Gene Information

Name : Isop_3344 (Isop_3344)
Accession : YP_004180455.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : 3.6.3.25
Position : 4892704 - 4893594 bp
Length : 891 bp
Strand : -
Note : COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: hoh:Hoch_5204 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter rela

DNA sequence : 
ATGATCGAACTTCGGAACATCACCCACTGGTATGACGATCCCGCTCGACCAGCATTGCGGAACGTATCGCTAAGGGTCGC
GGCGGGGGAACTGGTCGCCTTGGTGGGCGGGTCGGGGTCGGGTAAAACCACTCTGCTCAAAACGATCAACCGCCTGGTCG
AGCCCCGCCAGGGCGAAGTCCGGATCAATGGCCGAGACAACCGATCGATGCCCGCCCACCTGCTTCGGCGAACCATTGGC
CATGTGGTGCAAACCTCCGGACTGTTTCCCCACTGGACCGTCTTCGACAATGTCGCGGCTGTTCCGCGATTGCTGGGTTG
GTCTGCTGATCGGGTGCGTCAACGGGTCAATGAGCTAATGACCATGATCCGCCTGCCCGCCCAGGACTACGCCCAACGGT
TCCCCGATTCGCTCTCCGGCGGCCAACGCCAACGGGTCGGCTTCGCCCGTGCCCTAGCCGGTTCGCCCTCGATTCTGCTC
ATGGACGAACCCTTCGGCGCGTTAGACCCGGAAATCCGCGACGAGTTGCGGGCCGAGTTCCTTCAAGTCCATCGTTCCCT
CGGACTCACCACCGTGTTGGTGACCCACGACCTCGTGGAGGCGCTGGAATTGGCCGACCGGATCGCGGTGCTGGATCAAG
GCGAACTCATTCGTCTAGCCACTCCGCGCGAACTGGTGTCCCGGCCCAGTCACCCAGCCGTCGAGCGGATGCTCAACGGG
CCGGTGCGTCACGCCCGCTTGTTGGCGGGGTGGGCCGATCCGTCGGCCCAAGGTGCCATCCCTATCCCCTCGAACCTTCC
CGGCGACCTCGACGGGGAATCAACCCAGGTGATCCTCAAGTCGGACGCCGTTTCATCCTGTGTTGCGTTTTCTACCGATG
AAGCCAAGTGA

Protein sequence : 
MIELRNITHWYDDPARPALRNVSLRVAAGELVALVGGSGSGKTTLLKTINRLVEPRQGEVRINGRDNRSMPAHLLRRTIG
HVVQTSGLFPHWTVFDNVAAVPRLLGWSADRVRQRVNELMTMIRLPAQDYAQRFPDSLSGGQRQRVGFARALAGSPSILL
MDEPFGALDPEIRDELRAEFLQVHRSLGLTTVLVTHDLVEALELADRIAVLDQGELIRLATPRELVSRPSHPAVERMLNG
PVRHARLLAGWADPSAQGAIPIPSNLPGDLDGESTQVILKSDAVSSCVAFSTDEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-41 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-41 42