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Name : Isop_3131 (Isop_3131) Accession : YP_004180244.1 Strain : Isosphaera pallida ATCC 43644 Genome accession: NC_014962 Putative virulence/resistance : Unknown Product : protein translocase subunit secA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 4566350 - 4568458 bp Length : 2109 bp Strand : - Note : COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR020937: IPR011115: IPR000185: IPR014018: IPR 011130; KEGG: rba:RB2013 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking re DNA sequence : ATGGCCAGCGCCACGACCGATCCAGACTCCACCGCCGCCGCGCCTTCCCTCGACGCTGCGACCACGCCGGCGTCGTCGCC AACGGCGGTCCCCGATATGGGTCCGGCCCCGGCTTCGACCAGCACCCCGGTTTCTCGGGAGCGACCCTCTCAATCCGTGT CGGTCAACCGCCTCAGTCCGCTCTGGCTAAGCCGTTTCCAACAATGGACCCGACCCACCCATCAGGGGAAATTTGCCCGT TACTGTGTGATCGCCCACGCCGTCAACGCGATGGAGCCGCAACTCGAGCGACTCAGCGACCAAGAACTCCGCGCCCGAGC CAAAACCCTGCGCGACCGAGTGCGATCCGGCACCAAGATCGACAAGCTGATCGTCGAGGCGTTTGCCCTCGTGCGCGAGG CGGCCAAGCGGACGATCGGTCAACGTCTTTACGACGTGCAACTCGTGGGCGGGGCGGCGATCCACTTCCGCAACATCGCC GAAATGGAAACCGGCGAAGGCAAAACCTTGGTGGCCACCCTGCCGACCTTCCTGAATGCTCTGACCGGCAAGGGGGTCCA CGTCGTCACGGTCAACGACTACCTGGCGCAACGCGACGCCGATTGGAACCGACCGATCTACGAATTACTGGGCATGACGG TGGGGTGCATCCAAACCGGCCAACCGGACGCGGTGAGGCGTCGGCAGTACGCCCGCGACATCACCTATGGCACCTCCAAG GAGTTCGGCTTCGATTTCCTGCGGGACGAACTCAAGCGGCTCAATTTGGGCGACACTTCGCGGAAAACCTTCGAACAGAG CTTTCTGGGACGCAACCTGATCCATGAAAACGACAAACCGGTGCAGCGCGGCCATCACTTCGCCATCGTGGACGAGGCCG ATAGCATCCTGATCGACGAGGCGCGGACTCCGCTCATTATCGGGGCCAACAATCAGCCCACTCCTGAGGAGGCCGCGGCC TACTACGGGGCCGACCAAGTGGCCACCACGCTGGAAAGGGGCGTCGATTACAAGTACGACATCCAGGAACGCAAAGCCGA ACTCAACGCGGTGGGCCGACGCAAGGTCCAAGCGGTCGCTGGCCAACGGGTCTTCGCCTCGCTGACGGTGGACAAACTTT ACGAATATGTCGAACGTGCCTTGCGCGCCCATGTGGCTTATCTTAAAGATCGGGATTATGTTGTCCACGAAGGCGAAGTC GTCATCGTGGACGAGTTCACCGGACGTCTCATGCCGGGTCGTCAATGGCAAGACGGCCTGCATCAAGCCATTCAGGCCAA GGAGGGCTTGGAAATCACCTTGGAAACCATCACCGCGGCAAGGGTGACGGTGCAGGATTTCTTCCTACGCTACAAGAAAC TGGCCGGGATGACCGGGACCGCGTCGACCGACGCGGCTGAGTTGCGGCGGATTTACAAAGTCGGCGTCTTCAAGGTACCG ACTAACAAGCCCAGTCGCCGGGTCTGGATCCCCGACCGGGTCTTCTCGACCGAGGCCGAGAAGTTCCAGGCAGTCGCCGA CGAAATCGAACGGCTGCACGCCCGCGGCGTAGCGATCCTGGTGGGAACCCGCTCGATTGAAAAATCCGAGAAGCTTAGCG CCTTGTTGACGGCCAAGGGGATCGAGCATCAGGTGCTCAACGCCAAGAACCACGCTATTGAGGCTCAAATCGTCGCCCAG GCCGGTCAGCCGGGCAAGGTCACGGTGGCGACCAACATGGCTGGTCGCGGCACCGACATCAAGTTGGGTGAGGGCGTGGC GGCCAATGGTGGTCTTCACGTCATCGGCACCGAGCGCCACGAGGCGCGACGGATCGACCGTCAATTGGCCGGGCGTTGCG CCCGTCAGGGCGACCCCGGTCACGCTCAGTTCTTCGTGTCGCTCGAAGATGAAATCCTCGAAGCCTTCGGCGAAAAGAAG GCCAAAGCCATCCGCGACCGTTATCGAGGAAAGGGTGAACTGACCAGCCCCAAGATGCGAAAATTGATCTTCGCCGCCCA GCGCCGCAAGGAATGGCAGCACTATCGCGACCGTAAGCTCTTGATGCACTACGAAAAGCAACGGGCCGAGATGCGTAAGA ACATGGGACTGAATCCTGTGTTGGGTTGA Protein sequence : MASATTDPDSTAAAPSLDAATTPASSPTAVPDMGPAPASTSTPVSRERPSQSVSVNRLSPLWLSRFQQWTRPTHQGKFAR YCVIAHAVNAMEPQLERLSDQELRARAKTLRDRVRSGTKIDKLIVEAFALVREAAKRTIGQRLYDVQLVGGAAIHFRNIA EMETGEGKTLVATLPTFLNALTGKGVHVVTVNDYLAQRDADWNRPIYELLGMTVGCIQTGQPDAVRRRQYARDITYGTSK EFGFDFLRDELKRLNLGDTSRKTFEQSFLGRNLIHENDKPVQRGHHFAIVDEADSILIDEARTPLIIGANNQPTPEEAAA YYGADQVATTLERGVDYKYDIQERKAELNAVGRRKVQAVAGQRVFASLTVDKLYEYVERALRAHVAYLKDRDYVVHEGEV VIVDEFTGRLMPGRQWQDGLHQAIQAKEGLEITLETITAARVTVQDFFLRYKKLAGMTGTASTDAAELRRIYKVGVFKVP TNKPSRRVWIPDRVFSTEAEKFQAVADEIERLHARGVAILVGTRSIEKSEKLSALLTAKGIEHQVLNAKNHAIEAQIVAQ AGQPGKVTVATNMAGRGTDIKLGEGVAANGGLHVIGTERHEARRIDRQLAGRCARQGDPGHAQFFVSLEDEILEAFGEKK AKAIRDRYRGKGELTSPKMRKLIFAAQRRKEWQHYRDRKLLMHYEKQRAEMRKNMGLNPVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-88 | 42 |
