Gene Information

Name : Isop_2999 (Isop_2999)
Accession : YP_004180113.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 4370224 - 4371606 bp
Length : 1383 bp
Strand : +
Note : COGs: COG0213 Thymidine phosphorylase; InterProIPR017872: IPR017459: IPR000312: IPR013102: IPR 000053: IPR018090; KEGG: ank:AnaeK_0651 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidin

DNA sequence :
ATGCTCCATTCATCGCCCACTTCCGCACCCCAATACCGCGCGGTCGATCTCATCCGCCGCAAACGCGACGGTCAACCGCT
TGAACCCGACGAAATCGCCTGGATGGTCCGCGCCCACGAAACCGGCGCGGCCACCGATTATCACTGGGCCGCCATGCTGA
TGGCGATCCTCTGGCGCGGGATGAACCCCACCGAAACCGCTGCCTTAACCCGCGCCATGATTGACTCGGGTTCGGTCCTG
ACCTGGGACGACCTCGACGCGCCGCCGATCGACAAGCACAGCACCGGCGGCGTGGGTGACAAGACCTCCTTGATTCTGGG
ACCGATTGCGGCCGCCTGCGGCGTACCGGTGCCGATGGTCTCGGGACGCGGATTAGGACACACCGGCGGCACCCTCGACA
AGCTCGAAGCGATCCCCGGGGTTCGCGTCGCTCTCTCGACCGAGGAGTTCCGCCGCCTGGTCCGGCGACATCGTTTGGCC
CTGATCGGCCAGACCGACGAGATCGCCCCTGCCGACCGCTGGATGTACGCCCTGCGCGACGCTACCGCCACCGTCGAGTC
GATCCCGCTCATCACCGCCTCCATCCTCTCCAAGAAGTTCGCCGAGGGGATCGACGGCTTAGTGTTGGACGTGAAAACCG
GTGACGGTGCATTCATGGCCACCTTGGAGGACTCCCGGGCGTTGGCCGAGTCGCTGATCGTCTCGGGACGTGCCCTGGGC
AAGCGGGTCGTCGCCCTGGTAACCCGGATGGATCAACCGTTGGGCCGTCAGGTGGGCAACGCCCACGAGGTCGCCGAGGC
GATCGCCTGCCTCAAGGGAGACGGCCCCAACGACCTGACCGATCTCTCGCTTGAACTGGCCGCCGAGATGATCTGTCTAG
GAGGCGTCGAACCGAATCTCGACTCAGCCCGCCGCCGCGCCCAAGGCGCTTTAGAGGACGGCTCGGCCCTGGAGGTCTTT
CGACGGGTCATCGCCGATCAAGGCGGCGATCCCCGAGTGATCGATCAACCCGAAGCAATCCTGCCTCGGCCGCGAGGCCA
CGTCCTCATCGCCGCTGACCCCTCGACGCTTCCCGCCACGGGTGGCTTCGTCGCAGCCATCGCCTGCCGTCGCCTGGCCC
TGGCGATCATGCGGTTGGGAGCCGGGCGCGCCTTGACCACCGATCGCATCGACCATGCGGTGGGTCTTGAACTCTTCAAA
AAAGTGGGCGATCCCGTCGCCCCCGGCGAACCGTTGGCCCGACTCGACCACACCCTCGAACCAAACGATCCCCGGTTGGT
TCACGCACACCGCGAACTAACCGCCTGCTGGAGCTTCGCGCCCCTCCCCATCCCCAACCCCCCTTCCTTGATCGTCACTC
GACTGGCCAACCCCAACGAATGA

Protein sequence :
MLHSSPTSAPQYRAVDLIRRKRDGQPLEPDEIAWMVRAHETGAATDYHWAAMLMAILWRGMNPTETAALTRAMIDSGSVL
TWDDLDAPPIDKHSTGGVGDKTSLILGPIAAACGVPVPMVSGRGLGHTGGTLDKLEAIPGVRVALSTEEFRRLVRRHRLA
LIGQTDEIAPADRWMYALRDATATVESIPLITASILSKKFAEGIDGLVLDVKTGDGAFMATLEDSRALAESLIVSGRALG
KRVVALVTRMDQPLGRQVGNAHEVAEAIACLKGDGPNDLTDLSLELAAEMICLGGVEPNLDSARRRAQGALEDGSALEVF
RRVIADQGGDPRVIDQPEAILPRPRGHVLIAADPSTLPATGGFVAAIACRRLALAIMRLGAGRALTTDRIDHAVGLELFK
KVGDPVAPGEPLARLDHTLEPNDPRLVHAHRELTACWSFAPLPIPNPPSLIVTRLANPNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 4e-63 41