|
Name : Isop_2677 (Isop_2677) Accession : YP_004179796.1 Strain : Isosphaera pallida ATCC 43644 Genome accession: NC_014962 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3870940 - 3872703 bp Length : 1764 bp Strand : - Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR006195: IPR004365: IPR004364: IPR018149: IPR 002313; KEGG: psl:Psta_0647 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: L DNA sequence : ATGAAACGTCACTTCGACTTACGAAACAGGGATGGGAGATGGATTTGCGGTTCCGGAACTCGATTTTACGTTCCCGGAAC GAGTCGGCTTGACCAAGGGGGCCGATCCACTACAATCGAGCCGCTTCCAATTATGGCCGCAACGATCCGCACCGCCCGAA ACATTGAGGCGTGTGGACCGATGGATTGTGGCTTGAACGGCGGAGTCGGACAAGATTCTGGATTCAACGGGGTGGTGGTG CGGAGTGTCCCCCCAGAGGATTCGTCGCCAACGAACGAAAGTGTAGGCATGGTCGAGGAGTCGCGGGAGAGTCTGGAGGA AATTCGCCGCGAGAAGCTCACGCGGATCGCGGCCCTAGGGGTCGATCCGTGGGGTTCGCGGTTTGACAACCACGAACCGG TGGCGGTCGTGCGCTCTCGTGAGGTGGAGTTGCCCGAAGGGGCCGGAGCCGATCGGCCGGGACCGTCGGTGCGGGTGGCG GGACGGATTGTCCTTCGCCGTGGCCAGGGTAAGGTGGTGTTTTTGACGTTGCGCGACTGGACCGGCTCCCTCCAAATCTT CATCGGCAAAAACCAGGTGGGCGAGACGGCTTGGGCCTTGACCGGAGAACTCGACCTGGGCGACCTGATCGGGGTGGACG GCACCCTCGGCCATACCAAAACGGGAGAGTTGACCGTCTTTGCCACCGGTTTGACCTTCTTGAGCAAGTCGCTGTTGCCG CCGCCCGAGAAGTACCACGGGCTCACCGACACCGAGTTGCGGTCGCGAATGCGTTACGTCGATCTCGCCTCCAATCCGGA GTCCATGGCGGCGTTTCTGGGTCGTTCCAAGCTTGTCGCATCGTTCCGTTCCACTCTGGGGGACCAGGGCTACGTCGAGG TCGAGACCCCGATGATGCAGGCGATCGCCGGCGGCGCGGCGGCTCGTCCCTTTGTCACCCATCACAACGCCTTAGATTTG CAACTGTTTCTACGAATTGCGCCGGAACTCTATCTCAAGCGGCTGTTGGTTGGCGGAATGGAGCGGGTCTTCGAGATTGG CCGGGTGTTCCGCAACGAAGGGATCAGCCCCAAGCACAACCCCGAGTTCACCATGATGGAAGCCTATCAGGCTTACGGCG ACTACCGCACCATGATGGATTTGACCGAGCGTCTGATCGTCAACGCGATCAACGCGCTCGACGGCCGGTTCGAGCGGACT TGGAACGGTCGGGCGATCGACTTCACGCCACCCTGGCCCCGTCGGACTTACGCCGAGTTGTTCGAGGAACACGCCGGAGT TGCAATGGAGGATAGCGCGGGGGTCGTGGCTAAAGCGAGCGAACTGGGAATCGCCACGGCCGGCAAGGAGCATGACGTGA TCGTCTCTGAAGTCTTCGAGGAAACGGTAGAGGAAGCGTTGGAGGGACCGATCTTCGTGATTGACTACCCGGCGGCAATC TGCCCGCTGACCAAGCGCAAGGTTGGCGACCCCCGGTTCGCCGAACGTTTCGAGCTGTTCGTTCACGGGATGGAGTTAGC CAACGCCTACACCGAACTCAACGATCCTGACCTTCAGGATCAATTGTTTCGCCGTCAACTTCAGGGCCAAAAGGAGGAGG ACTCGATGGCTCGGATCGACGACGACTTCATCCGGGCTCTCAAGCACGCCATGCCCCCTGCGGGCGGCCTAGGCATTGGA ATCGATCGGTTGTGCATGGTGCTGCTCGACAAGGCCAGCATCCGCGACGTGATTCTCTTTCCTCTGCTGCGTCCCGAGTC GTAG Protein sequence : MKRHFDLRNRDGRWICGSGTRFYVPGTSRLDQGGRSTTIEPLPIMAATIRTARNIEACGPMDCGLNGGVGQDSGFNGVVV RSVPPEDSSPTNESVGMVEESRESLEEIRREKLTRIAALGVDPWGSRFDNHEPVAVVRSREVELPEGAGADRPGPSVRVA GRIVLRRGQGKVVFLTLRDWTGSLQIFIGKNQVGETAWALTGELDLGDLIGVDGTLGHTKTGELTVFATGLTFLSKSLLP PPEKYHGLTDTELRSRMRYVDLASNPESMAAFLGRSKLVASFRSTLGDQGYVEVETPMMQAIAGGAAARPFVTHHNALDL QLFLRIAPELYLKRLLVGGMERVFEIGRVFRNEGISPKHNPEFTMMEAYQAYGDYRTMMDLTERLIVNAINALDGRFERT WNGRAIDFTPPWPRRTYAELFEEHAGVAMEDSAGVVAKASELGIATAGKEHDVIVSEVFEETVEEALEGPIFVIDYPAAI CPLTKRKVGDPRFAERFELFVHGMELANAYTELNDPDLQDQLFRRQLQGQKEEDSMARIDDDFIRALKHAMPPAGGLGIG IDRLCMVLLDKASIRDVILFPLLRPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Isop_2677 | YP_004179796.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-80 | 42 |
