Gene Information

Name : Isop_0197 (Isop_0197)
Accession : YP_004177343.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 289890 - 290888 bp
Length : 999 bp
Strand : +
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: psl:Psta_2360 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal d

DNA sequence :
GTGTTGTCCCCTACCACGGCCTGCTCTTCGTCCCCCCTCCCATCGCACCGTCGCGTCCGCATCGGCACCCGCGGCAGTCC
CCTCGCGCGCTGGCAGGCGGAATGGGTGGCGGCTCGTCTCCGCGACGCTTGGCCCGGCTTGACCGTCGAACTCGTCGAAA
TCAAAACCCTAGGCGACCGCGACCGCAACTCCCCCCTGGCCTCCATCGGCGGCGCGGGGCTCTTCACCAAGGAAATTCAG
CGCGCTTTGCTGGATTGCCGGGTAGAGATCGCCGTCCACAGCCTCAAGGATCTGCCCACGCAGCCGGTTGAAGGATTGAT
CCTGGGGGCGGTCCCGCCCCGCGAGGAACCCCGCGACGCCCTGATTGCTCCGGCTCACGGTCTACTCGAACACCTTCCCG
CCGCAGCCCGGGTCGGCACCGGTTCGTTGCGCCGCCGAGCCCAACTGTTGTGGATGCGTCCCGATTTGGAAGTCGTCGGA
GTGCGGGGCAACGTCGAAACCCGACTCAACCACGCCCTTGAAGGTCGTCTCGATGCTGTACTGCTGGCGGTCGCCGGTCT
GCGTCGCCTGGGTCTGGACTCGGCGATCACCCAAACTCTGGGACCGCCCGACTTTCTGCCGGCCGTCGGCCAAGGAGCGC
TAGGGATCGAGTGCCGCGGCGACGATCCCGATACCCTTGCCCTGCTCGCCCCGCTGGACGACCCAGCCAGCCGCGCCTCC
GTTCTGGCCGAACGCGCGCTGCTGGCCGACCTGGAAGCCGGGTGCATGGTCCCCCTGGGAGCCTGGGGCCGCTCGGAGGC
GGATGGCCTTCTCGCGCTGGATGCGGCGGTGCTGGACCCCGCCGGACGCCAACGCCTCGCCGCCCACGCCTCCGGTCCAG
CCAATGACCCCCAAACCCTAGGGTTGGCCGTTGCCGCCGAACTCCGCCGCCAAGGGGCTGAAGCCCTCCTGCGTCCTTGT
GGCGAAGAACCGGCGAAGGAACCGTCCTCGTCTCATTAA

Protein sequence :
MLSPTTACSSSPLPSHRRVRIGTRGSPLARWQAEWVAARLRDAWPGLTVELVEIKTLGDRDRNSPLASIGGAGLFTKEIQ
RALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHLPAAARVGTGSLRRRAQLLWMRPDLEVVG
VRGNVETRLNHALEGRLDAVLLAVAGLRRLGLDSAITQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRAS
VLAERALLADLEAGCMVPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELRRQGAEALLRPC
GEEPAKEPSSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-39 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-39 46