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Name : Isop_1827 (Isop_1827) Accession : YP_004178958.1 Strain : Isosphaera pallida ATCC 43644 Genome accession: NC_014962 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2662295 - 2662831 bp Length : 537 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: tfu:Tfu_2476 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGTCCAAAGCCAAACCCAAACCGACCGCGCCAGCTTCCTCCCCCGCCAGCTCCAAGAACAAAGGCAAGGGCAAAGCCGA TGAAGCCGCCGGGATCAAGGTCGTAGCACGTAACCGGCGGGCCCGATTTGAATACGACCTGCTGGAAAAAATCGAGGCCG GTCTGGTCCTTACCGGCACCGAGGTCAAAAGCCTCCGCAACGGCAAGGCCAACCTGGAGGATTCCTACGCTATGCTCGAT CGCGAGGAACTTTGGCTCCACGGCGCGGATATTCCCGAATACCTTCAAGCCAACCGGATGAATCATAAACCCAAACGGTC CCGCAAACTCCTGCTGCATCGCCGCGAAATCAACCGGCTGGCCAGTAAGACCGCCGAACGCGGCTTGACCATCGTTCCCC TGTCGATCTATTTCAAAAACGGCATCGCCAAGGTCGAAATCGCGGTGGCACGCGGCCGCAAACTCTACGACAAACGACAA GCCCTCAAAGAGCAGGATGCCAAACGGGACATCGACCGCGCCTTGAGACGAGGATAA Protein sequence : MSKAKPKPTAPASSPASSKNKGKGKADEAAGIKVVARNRRARFEYDLLEKIEAGLVLTGTEVKSLRNGKANLEDSYAMLD REELWLHGADIPEYLQANRMNHKPKRSRKLLLHRREINRLASKTAERGLTIVPLSIYFKNGIAKVEIAVARGRKLYDKRQ ALKEQDAKRDIDRALRRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-32 | 55 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-33 | 52 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-20 | 42 |
