Gene Information

Name : Isop_1455 (Isop_1455)
Accession : YP_004178589.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 2107635 - 2109308 bp
Length : 1674 bp
Strand : -
Note : COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: ade:Adeh_2974 L-lactate transporter; PFAM: L-lactate permease; SPTR: L-lactate transporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport

DNA sequence :
ATGTGGGTCCAGACCTATGATCCGCTGGGTTGGTGGCCTGGTTCTACCCTGGCCGCGGCGTTGCCGGTCGCGGTGTTGCT
GGGGACCCTAGCCACGGGACGGGTTCGGGCCTGGGTCGCGGCCGTTTCGGCTCTCACCCTGGCCTTGCTGGTGGCCCTAA
CCATTTTCAAGATGCCTTGGCAGGCCGCATGGGGAGGAGTCGGGGTTGGTTTGGTCTTCGCCCTCAGCCGGATCGTTTGG
TTGATCGTCGCGGCGGTCTTTTTGTACAACGTGGTTGTCGAGACCGGTTCGTTTGCCGTGATGCGAGCTTCGATCGCGGG
TCTTTCCCAAGATCGTCGAATTCAAGCGGTTCTGATCGCCTATGCCTTCGGCGCATTCATCGAAGGGATCGCTGGCTTCG
GCGCGCCGGTGGCCATCTCGGCGGCGTTCCTGGTGGGTCTGGGCTTTCCACCGTTGCAGGCGGCGATCCTCTGCCTCGTG
GCCAACACCGCACCGGTGGCGTGGGGATCTCTCGGCATCCCGATCCAGACCCTCGGTCAAGTCACCAAGCTGAACGTCGA
GTCGCTCAGCGCCACGGCGGGCCGGATCCTACCACCAATTTCGCTCATTGTGCCATTTTGGTTGGTGGCGATGATGTCCC
CTTGGCGACGCCTGGGCGAGGTCGCGCCGGCGATTCTGGTGCTGGGCGGAACCTTCGCGGTCGTCCAGGGGCTTTGGGCC
AACTTCGTGGGGGTCGATTTGGTCGATCTGGCCGCCTCTTCCTGTTCGTTGGCCGTCGGCGCGATTTTCCTACGGTTTTG
GCAACCTCGACACGTGTACCGCTTTGAACACGATCTCGATTCTGACACCCACGCCACGGGGTTTGTGGGGGGGCCTCGGG
GGCGTCTTCACGCCGCTTCGGTTCGCCGGGCGTGGACACCATTCGTCATTCTGGCGGCCCTGGTTTTGATCTGGGGGTTG
GAGGAGCCCAAGCGATGGATGAACGCGGTCTCGACCGTTTCGGTTCCCATGCCCGGTCTTCATCTGGCGATCGCCAAAGG
GCCGGAGTTGACCGGACGGGAGCAAGTTGACCCCGAACGCGACGCTTTGGAAGGTCTGGTGGTCCTGCCCACACTGGGAG
CCACCGGGACCGCCGTCTTCCTGGCGGCGATTCTCAGCGGTCTTTATTTGGGGGTTGCCCCAGCCCGGTTGGTCTTCCTG
CTCGGCCGCACCCTTTGGAGTCTTCGAGCCGCTGCTGCGGCGATCCTCGCCATGTTGGCGCTGGGTCACCTGACCCGGTT
TTCGGGAATGGACGCCGTGCTTGGTCTGGCCTTGACCCGATCAGGACCCTGGATCTATCCGATCCTGGGGACATTTCTCG
GTTGGCTGGGTGTGGCCTTGACGGGATCGGACACCGCGAGCAACATCTTGTTCGGGAACCTCCAAGTCGTGACTGCCGAC
AAGCTTGGACTCAACCCGATCCTGATGGCGTCGGCCAACTCGACCGGAGGAGTGATGGGTAAGATGGTCGATGCGCAATC
GATTGTTGTCGCGGCCGCCGCCACTGGGATTCACGGCAAGGAAGGCCCCATCCTTCGCGCAGTTTTTCCTCACAGTCTGG
CGTTAGCCGGGTTGGTCGCGTTGGTCGTTTGGGTCTACGCCCATGTGGCTCCAAACGCGATCCCTTTGCCTTAG

Protein sequence :
MWVQTYDPLGWWPGSTLAAALPVAVLLGTLATGRVRAWVAAVSALTLALLVALTIFKMPWQAAWGGVGVGLVFALSRIVW
LIVAAVFLYNVVVETGSFAVMRASIAGLSQDRRIQAVLIAYAFGAFIEGIAGFGAPVAISAAFLVGLGFPPLQAAILCLV
ANTAPVAWGSLGIPIQTLGQVTKLNVESLSATAGRILPPISLIVPFWLVAMMSPWRRLGEVAPAILVLGGTFAVVQGLWA
NFVGVDLVDLAASSCSLAVGAIFLRFWQPRHVYRFEHDLDSDTHATGFVGGPRGRLHAASVRRAWTPFVILAALVLIWGL
EEPKRWMNAVSTVSVPMPGLHLAIAKGPELTGREQVDPERDALEGLVVLPTLGATGTAVFLAAILSGLYLGVAPARLVFL
LGRTLWSLRAAAAAILAMLALGHLTRFSGMDAVLGLALTRSGPWIYPILGTFLGWLGVALTGSDTASNILFGNLQVVTAD
KLGLNPILMASANSTGGVMGKMVDAQSIVVAAAATGIHGKEGPILRAVFPHSLALAGLVALVVWVYAHVAPNAIPLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 1e-64 43