Gene Information

Name : Isop_1212 (Isop_1212)
Accession : YP_004178347.1
Strain : Isosphaera pallida ATCC 43644
Genome accession: NC_014962
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 1741677 - 1742966 bp
Length : 1290 bp
Strand : +
Note : COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rme:Rmet_1098 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein/P47K; PFAM:

DNA sequence :
ATGACCATACTTTATAACCCAATCGGGTCGGAATCCGGCGCATCGGACATGGCGGCCACGACGGCGCGTAAACTGCCCGT
CACGGTGCTGTCGGGCTTCCTGGGAGCGGGCAAAACCACCTTGCTCAACGAAGTGCTGCGCAACCGCGCTGGCATGAAGG
TCGCGGTGATTGTCAACGACATGAGCGAAGTCAACATCGACGCTCAACTGATTGAGCAGGGAGGCGCGGCGCTCTCGCGG
ACCGAGGAAACCCTGGTTGAGCTCTCCAACGGCTGCATCTGCTGTACCTTACGGGAGGATCTAGTTCGTGAAGTGGCGGC
GTTGGCGGCCCAAGGACGATTCGACTACCTCTTGATTGAATCGACCGGCATTTCTGAACCCCGTCCGGTGGCCGAAACCT
TCCTGTTCGAGATCGAAGGGGCGCGTGCGCTCAAGGATGTGGCCGAACTCGACACCCTGGTGACGGTGGTGGATGGCTAC
AACTTCCTTCATGATTTCATTGAGGCCGAAGACCTCAAAAGCCGCGGTCAAGCCGCGAGCGAAAACGACGAGCGGACCGT
CGCTGATCTTTTGATTGATCAGATCGAGTACGCCGATGTCGTGATCCTCAACAAAATCGACCTGATCAGCCCGACTCAAA
AGGCGCGGCTTCGAGGAATTCTTCGGTCGCTCAACCCCCGGGCGCGTCTCATCGAAGCCGAATTTGGTCGGGTTCCTCTC
GACGCGATCCTGAACACGGGTCGATTTGACCTGGAGCGTCTGGTGTTGGAGTCGGGCTGGCGTTTGGCCGCGCGGGGCGA
GGTGGTTTCCGAAGCCGAGGAATACGGCGTGAGGCATTTCGTGTACCGGGCGCGTCGGCCCTTCCACCCAGCGCGGTTTT
GGGCTTGCCTCAACGCCGGATGGCCAGGGGTGATTCGCTCCAAGGGCTTTTTCTGGCTGGCGAGCCGCCCGGATCGAGTC
GGCGTCTGGTCGCAAGCCAGTCGCATTGCTCGGATCGACGCCGGCGGCTTTTGGTGGGCGGCCGTCCCGCCCGAAGCCCG
GCCCGACACTCCAGCGTTCCGCGCTGCTTTGGAACGGCTCTGGGACGAGCATGTGGGCGATTGCCGTCAAGAACTCGTTT
TGATCGGCGTAGGTCTTGATCCTGTTGAGCTGACTCAACGGCTCGACGCCTGCCTACTCAATGACGAAGAATACCGTCAA
GGCCCACCCGCGTGGATTGGCTACGACGATCCGTTCCCCGAATGGCCCAACCCGGCCACCCCGTCATCTACTGCGACGAA
CTTGGCGTGA

Protein sequence :
MTILYNPIGSESGASDMAATTARKLPVTVLSGFLGAGKTTLLNEVLRNRAGMKVAVIVNDMSEVNIDAQLIEQGGAALSR
TEETLVELSNGCICCTLREDLVREVAALAAQGRFDYLLIESTGISEPRPVAETFLFEIEGARALKDVAELDTLVTVVDGY
NFLHDFIEAEDLKSRGQAASENDERTVADLLIDQIEYADVVILNKIDLISPTQKARLRGILRSLNPRARLIEAEFGRVPL
DAILNTGRFDLERLVLESGWRLAARGEVVSEAEEYGVRHFVYRARRPFHPARFWACLNAGWPGVIRSKGFFWLASRPDRV
GVWSQASRIARIDAGGFWWAAVPPEARPDTPAFRAALERLWDEHVGDCRQELVLIGVGLDPVELTQRLDACLLNDEEYRQ
GPPAWIGYDDPFPEWPNPATPSSTATNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-79 47
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 9e-80 47