Gene Information

Name : Desmu_0570 (Desmu_0570)
Accession : YP_004176361.1
Strain : Desulfurococcus mucosus DSM 2162
Genome accession: NC_014961
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 567727 - 568731 bp
Length : 1005 bp
Strand : -
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR001852; KEGG: dka:DKAM_0482 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate

DNA sequence :
GTGAAGCTCGTAGACGCCTACAGCCTCCTCGAGAACATGGAGAACCTCCTCTACAAGCTACTTGAGTACAGGGATAGGGT
TCTCGAGGAGGGTTCGGCACCCGGGAGAACCGTTGCAACCCCCCTCGTGAAATACGGCTTCGTCTCCATGCTTAAAGGCG
GCGTGATAATGGATGTGACGAACCCTGAGCAGGCTGGAATAGCCGAGGATGCTGGTGCAGTCGGCGTCATGGTGCTGGAT
AAGCTCCCATACGATGTTAGAATGGCTGGCGGAGTAGCTAGGACGGCCGACGTCAAGGTGATCGAGGAGGTGATGAACAC
TATAACCATTCCTGTCTCAGCTAAATGCAGGATAGGGCATGAATGGGAGGCAAGGATCCTGGAGGAGATAGGCGTCGACC
TCATAGATGAAAGCGAGGTTTTAACACCGGTTGATGAGAAGGCCCATATAGATAAATGGTTGTTTAAGACGCCCTTCGTC
AACGGTGCGAGAAGCCTCCCTGAAGCACTGAGGAGAATACATGAGGGTGCATCAATGATTAGGACTAAGGGTGAGCCTGG
AACGGGAAACGTTGCAGAGGCCGTTAGACACATGAAGCTCGTGAACAGAGACATCTATGTTCTCAACGGCTACTACAGGA
ACGGGGATTTAGAGGCTATAAGGATCTACTCGAGGGAGAACAAGGTTCCCTACGAGCTAGCCCTCCTCACGGCGAGACTC
GGCAGGCTCCCCGTGGTGAACTTTGCGGCGGGAGGCGTCGCTACGCCGGCTGATGCAGCATTGATGATGTGGCTGGGTGC
AGACGGGGTCTTCGTGGGCTCCGGCATATTCAAGAGCAGTGATCCGGAGGCGAGGGCCCACGCCATAGTCTTGGCTACAG
CCTACTGGGACGACCCTGAGACAGTGCTGGAGGCTCAGAGAATGGTGTCCGAGAAAGCCTCGATGCTCGGCCTGGATGTC
AGGCAGCTTAAACCCGAGGAGTTAATGCAGGTGCGCGGTGAGTAG

Protein sequence :
MKLVDAYSLLENMENLLYKLLEYRDRVLEEGSAPGRTVATPLVKYGFVSMLKGGVIMDVTNPEQAGIAEDAGAVGVMVLD
KLPYDVRMAGGVARTADVKVIEEVMNTITIPVSAKCRIGHEWEARILEEIGVDLIDESEVLTPVDEKAHIDKWLFKTPFV
NGARSLPEALRRIHEGASMIRTKGEPGTGNVAEAVRHMKLVNRDIYVLNGYYRNGDLEAIRIYSRENKVPYELALLTARL
GRLPVVNFAAGGVATPADAALMMWLGADGVFVGSGIFKSSDPEARAHAIVLATAYWDDPETVLEAQRMVSEKASMLGLDV
RQLKPEELMQVRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-58 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-58 55
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-58 54