Gene Information

Name : ANT_07900 (ANT_07900)
Accession : YP_004173424.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 861672 - 862361 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAAGACCATTTTGATTGTGGATGACCAGTCGAGTGTAAGGCAATTGTTACAGGAATACCTGACCGAACAGGGCTA
TCGGGTGCTGACCACCACCGATGGACAGAGCGCCCTGTACATTGCCCGCCATGAAAACCCCGATCTGATTCTGCTGGATA
TCATGATGCCGCGCATGGACGGCTATCAATTCCTGCGGCAGTTCCGGCAGGAACGTCAGACTCCGGTCATCATCATCACC
GCGCGGGAAGAGGAAACCGATGCCGTGCTGGGGCTGGATTTAGGCGCAGACGATTACATTATTAAGCCTTTTCGCATGCG
GGAACTGGCGGCGCGCATCCGCGCCATTCTCCGCCGTGGAGAGGAACATCCTGACAAGCAGGAAATTCTGCGCGCCGGGG
AGATTATTCTCGACGAAACCACCCACACCGTAACCGTCTCGGGCAAGCCCGTTTCCCTTACCCCCATTGAGTTTGACCTG
CTGGCAACCTTGATGCGCTCGCCGGGCAGGGTATATACCCGCGCGGAACTGGTTGAAATCCTTGCCGACAGCGGCTTCGC
CGGGATTGATACCACCCTCAACGTACATGTGCGCAACCTGCGCCTGAAAATTGAACCCGACCCCAAAAACCCGCGCTATA
TCGAGACAATTTTCGGCATTGGCTACCGCTTTCGCAAACCACAGGATTAA

Protein sequence : 
MSKTILIVDDQSSVRQLLQEYLTEQGYRVLTTTDGQSALYIARHENPDLILLDIMMPRMDGYQFLRQFRQERQTPVIIIT
AREEETDAVLGLDLGADDYIIKPFRMRELAARIRAILRRGEEHPDKQEILRAGEIILDETTHTVTVSGKPVSLTPIEFDL
LATLMRSPGRVYTRAELVEILADSGFAGIDTTLNVHVRNLRLKIEPDPKNPRYIETIFGIGYRFRKPQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_07900 YP_004173424.1 OmpR family two-component response regulator AE000516.2.gene3505. Protein 3e-28 44
ANT_07900 YP_004173424.1 OmpR family two-component response regulator AE016830.1.gene1681. Protein 4e-28 41
ANT_07900 YP_004173424.1 OmpR family two-component response regulator CP004022.1.gene3215. Protein 5e-20 41
ANT_07900 YP_004173424.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_07900 YP_004173424.1 OmpR family two-component response regulator VFG1390 Protein 1e-21 41
ANT_07900 YP_004173424.1 OmpR family two-component response regulator VFG1702 Protein 5e-22 41