Gene Information

Name : ANT_26560 (ANT_26560)
Accession : YP_004175282.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2934850 - 2935557 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
ATGCTTATGAACGAGGGAAGAAAGTTGTCTCCAGCAAAGATTCTCTTAATTGACGACGAAATTTCAATCCATACGGTCGT
GACGGCATACTTAAAAGCAGAAGGCTATGAGTACCAATCGGCAATGGACGGGCCTTCAGGCTTGGCAATGGCACGCTCTT
TCAAACCGGATATCATTATTCTGGACGTAATGCTACCGGGCATGGACGGCATCGAACTCTTAGCTCATTTGAGGCGGGAG
TCAAACGTGTACGTCATCATGCTGACAGCGCGCTCTGAAGAAACAGACAAAATCGTTGGGCTTTCGGTCGGTGCAGATGA
CTATCTGACAAAGCCTTTCAGTCCACGAGAGTTAATGGCTCGTATCAAAGCGGCTCTGCGGCGATTGAATCCTCCGCCAG
CCGCCACAAGTGAGACTGCCATGCTTAATTTTGCTCATGTGCGAATCGATCCATCCGCACGGCGCGTTTGGGTCAATAAC
ACTTTGATTGACCTCACTACTGTGGAGTTTGATCTACTGCTTACGCTTGCCCAGCATCATGGCAGGGTGCTGAGTCGAGA
ACAATTGCTGGAAAAAGTGTGGGGGTATGATTATTATGGCGATACTCGTGTTGTCGATGTACATATCGGGCATATTCGTC
AGAAACTGGGCAACAACACATGGATTGAAACCGTTCGCGGGGTAGGCTATCGCTTTGAAGACAATTAG

Protein sequence :
MLMNEGRKLSPAKILLIDDEISIHTVVTAYLKAEGYEYQSAMDGPSGLAMARSFKPDIIILDVMLPGMDGIELLAHLRRE
SNVYVIMLTARSEETDKIVGLSVGADDYLTKPFSPRELMARIKAALRRLNPPPAATSETAMLNFAHVRIDPSARRVWVNN
TLIDLTTVEFDLLLTLAQHHGRVLSREQLLEKVWGYDYYGDTRVVDVHIGHIRQKLGNNTWIETVRGVGYRFEDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-29 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_26560 YP_004175282.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 2e-44 49
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_007793.3914279.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_002745.1124361.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_009782.5559369.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_002951.3237708.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_003923.1003749.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_002758.1121668.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_009641.5332272.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_013450.8614421.p0 Protein 2e-42 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_002952.2859905.p0 Protein 3e-42 46
ANT_26560 YP_004175282.1 OmpR family two-component response regulator AE016830.1.gene1681. Protein 6e-43 46
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_007622.3794472.p0 Protein 3e-42 46
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_012469.1.7685629. Protein 9e-37 44
ANT_26560 YP_004175282.1 OmpR family two-component response regulator NC_012469.1.7686381. Protein 4e-38 42
ANT_26560 YP_004175282.1 OmpR family two-component response regulator AE000516.2.gene3505. Protein 2e-38 42
ANT_26560 YP_004175282.1 OmpR family two-component response regulator CP000647.1.gene2531. Protein 7e-31 41
ANT_26560 YP_004175282.1 OmpR family two-component response regulator CP004022.1.gene1676. Protein 4e-28 41
ANT_26560 YP_004175282.1 OmpR family two-component response regulator CP001918.1.gene5135. Protein 9e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_26560 YP_004175282.1 OmpR family two-component response regulator VFG1389 Protein 4e-36 47
ANT_26560 YP_004175282.1 OmpR family two-component response regulator VFG1563 Protein 2e-29 41
ANT_26560 YP_004175282.1 OmpR family two-component response regulator VFG1702 Protein 3e-29 41