Gene Information

Name : ANT_22660 (ANT_22660)
Accession : YP_004174892.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Resistance
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2503636 - 2504316 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGACGAGCGAGTTAATCCTTCTGGTGGATGATGAGCCCAGCATCGTCTCGCTGTGTCGGATGTACCTGGAGCGCGAAGG
ATTCCGGGTGCAATCGGCGGGAGATGGCGTGACTGCTCTGGAGATGCTCAAAAAATCCCCTCCCGACCTGATGATTCTGG
ATGTCATGTTGCCAGAATTGGATGGTTTTGAAGTTTGTAAACAACTCCGCGCCCAGAACGACCCTTTGCCCATTTTGATG
CTGACCGCGCGGGACGAAGATTACGATAAAATTTTGGGCTTGGAACTGGGCGCGGATGATTACATGACCAAGCCTTTCAA
TCCACGGGAACTGGTTGCACGGGTCAAAGCCATTTTGCGGCGTACCCGCCATCAGACTCACGAAGACCAGAATGTTATTC
GTATAGGTAATATCGTCGTTGATCCAGCAAGGTATGAAGTCCGCAATGGAGATTACCTCATTCCTTTGAGAGCGCAGGAA
TTTGAGGTGCTTTGTGTCCTTGCCCGCAATGCAGGCAGAGTTTTAAGCCGCGAACAATTGCTCGAAAAAGCCTGGGGTTT
TGATTTTTACGGGCAAACCCGCACCGTGGATGTGCATATTGCCCAGTTGCGTCGCAAATTAGCCGATTCCGGGGTGACGA
TTGAAACGGTTACCGGTGTTGGCTATAAACTGGTGGGTTGA

Protein sequence :
MTSELILLVDDEPSIVSLCRMYLEREGFRVQSAGDGVTALEMLKKSPPDLMILDVMLPELDGFEVCKQLRAQNDPLPILM
LTARDEDYDKILGLELGADDYMTKPFNPRELVARVKAILRRTRHQTHEDQNVIRIGNIVVDPARYEVRNGDYLIPLRAQE
FEVLCVLARNAGRVLSREQLLEKAWGFDFYGQTRTVDVHIAQLRRKLADSGVTIETVTGVGYKLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-33 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002952.2859905.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_003923.1003749.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002758.1121668.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_009641.5332272.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_013450.8614421.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_007793.3914279.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_007622.3794472.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002745.1124361.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_009782.5559369.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002951.3237708.p0 Protein 1e-50 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 2e-48 51
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_012469.1.7686381. Protein 5e-46 47
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AE016830.1.gene1681. Protein 4e-43 47
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_012469.1.7685629. Protein 2e-44 45
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP000675.2.gene1535. Protein 1e-35 44
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AF162694.1.orf4.gene Protein 1e-30 43
ANT_22660 YP_004174892.1 OmpR family two-component response regulator DQ212986.1.gene4.p01 Protein 3e-32 43
ANT_22660 YP_004174892.1 OmpR family two-component response regulator BAC0197 Protein 5e-31 43
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_005054.2598277.p0 Protein 1e-33 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_011595.7057856.p0 Protein 9e-36 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_014475.1.orf0.gen Protein 1e-33 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_010410.6002989.p0 Protein 9e-36 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP000034.1.gene3834. Protein 8e-30 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP004022.1.gene3215. Protein 2e-34 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002695.1.915041.p Protein 8e-30 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP001138.1.gene4273. Protein 4e-29 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator Y16952.3.orf35.gene. Protein 3e-25 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AE000516.2.gene3505. Protein 2e-34 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP001918.1.gene3444. Protein 8e-34 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP000647.1.gene2531. Protein 1e-34 42
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AF155139.2.orf0.gene Protein 1e-40 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AF310956.2.orf0.gene Protein 1e-33 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AM180355.1.gene1830. Protein 4e-32 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AE015929.1.gene1106. Protein 5e-35 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator FJ349556.1.orf0.gene Protein 8e-39 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator AE016830.1.gene2255. Protein 1e-32 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator U35369.1.gene1.p01 Protein 1e-32 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_010400.5986590.p0 Protein 1e-34 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator BAC0533 Protein 3e-29 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP000647.1.gene4257. Protein 3e-29 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator EU250284.1.orf4.gene Protein 9e-30 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator U82965.2.orf14.gene. Protein 7e-27 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_008702.1.4607594. Protein 2e-33 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator BAC0596 Protein 3e-32 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator NC_002695.1.916589.p Protein 9e-34 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator BAC0039 Protein 1e-33 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP001138.1.gene2239. Protein 3e-32 41
ANT_22660 YP_004174892.1 OmpR family two-component response regulator CP000034.1.gene2186. Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_22660 YP_004174892.1 OmpR family two-component response regulator VFG1390 Protein 3e-42 45
ANT_22660 YP_004174892.1 OmpR family two-component response regulator VFG1389 Protein 2e-32 44
ANT_22660 YP_004174892.1 OmpR family two-component response regulator VFG1386 Protein 5e-35 43