Gene Information

Name : ANT_22620 (ANT_22620)
Accession : YP_004174888.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Virulence
Product : putative polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 2497903 - 2499810 bp
Length : 1908 bp
Strand : -
Note : -

DNA sequence :
ATGCGCTCCAAACCTGTACCCAGTGTAAGAAACCGTTACCTCTTGATAGGCGATCTACTATTGATCGTGCTTTCTGTTTT
GGGAAGTTACGCGCTTCGCTTTGAACTGGGAAATTTCTTTTTCTTTTACCTTCCCTCGGCTTACTGGATGGCGGGAGCGG
CGTTAATCATCAAACCTCTGGTGTATTACTTCTTTGGTTTATACCGCCGCATGTGGATTTATGCCAGCATCCGCGAAGCC
CTGATGGTGGTGGCTGCCTCAGTAACCGCTTCGGCGTTGCTTGCGGCTACCATGATTGCTCTGACTTCCTTCCGCCTTTT
TGTGGGCTTCCCCCGTTCGGTGCTGATTATTGATTTCTTCCTTTCCGTGTTTGCAGCAGGTGGATTGCGTTTTACCCTGC
GTTTATTAGCAGAAAGTCGCATTAACCAGGCAATTCAGGAAGGCGCGGGACTTCGTCAACCTCAGAAGGTGTTAATTGTT
GGCGCTGGGGATGCCGGCGCGCTGGTGGTGCGGGAATTGCAGAAAAATCCTCAACTGAATTTGATCCCGATAGGCTTCCT
GGATGACAATCCAGCCAAACAACGACAGCAAATTTATGGTGTGCCGGTTGTTGGCACTTTGAGCGATCTGGAAAAGGTCA
TCGATCAAACCCGGGCTCAACAGGTTATCATTGCTATTCCTTCGGCGGCAGGGCGGGTGGTGCGTCTGGTAGCGGATGCC
TGCCGCGCCAAAGGGGTGCCTTTCCGCACCATGCCCGGAATTTATGAATTGCTGGGAGGAACGGTAAGTGTCAGCCGTCT
CCGCGAAGTAGACATTACCGACCTCTTGCGGCGTAACCCTGTGCAGATAGACGAATCCCTTGTCGGCGCAACCCTTTCGG
GGAAAGTGGTACTGATTACCGGCGCTGGTGGTTCCATTGGTCGGGAACTGTGTCGGCAGGTTGCCCGTTGGGGACCCAGC
GAGTTAATTCTGCTTGGTCATGGCGAAAACAGCATCTTTGAAGCCCTCATGGAACTGCGGGAGAATTTTCCGTCCCTGCT
CTTTCGCCCTGTGATTGCCGATGTGCGCGATTATGGGCGTATTCGGAATGTTTTCCTGCGTCATCGTCCCGAGATTGTCT
TTCACGCCGCTGCGCATAAGCATGTGCCTTTGATGGAATTAAATGTGGAAGAAGCCGTGACCAATAATGTGCTGGGTACC
ATGAATGTAGTCAGCGCTGCCCTGGAAAGCGGCGTGGAGCGCTTGGTGATGGTTTCTACAGATAAGGCGATTCGCCCTGC
CAATATCATGGGTGCCACCAAGCGCTTGGCTGAGATGATTGTGCTGGATGCGGCGCGTCGTTCCGGGAGGTCGTATTCCG
TCGTGCGTTTTGGCAACGTACTGGGAAGTCGTGGGAGTGTGGTGCCTCTGTTCAAGCGCCAAATCGCCCGTGGAGGTCCG
GTCACGGTCACCCATCCAGAGATGCGACGGTATTTCATGACCATTCCGGAAGCGGTGCATCTGGTCCTGCAAGCCTCGGC
AATGGGAGAAGGTGGCGAGACGTTTGTCCTCAATATGGGAGAACAGATTCGAATTCTCGATCTGGCAGAGGACTTAATTC
GCCTCTCAGGATTGGAACCGGGAAAGGATATCGAAATTGTCTTTACCGGTATCCGCCCGGGCGAGAAATTGAGCGAAGAC
TTGTGGGATGAAGGGGTTCCCATTGAAAGGACAGAACATCCCGAAATTTTCCGGGTCAACAGCGAGACCCCTGAATTGAG
CGGGGAGGAATTACGCAGCCTGGTGGAACAGGTCTTAAGACTTGCTCAGGAAGGGGATACGCATACCCTGATTAATCTCC
TGGACGAAACTATCCCCGGTGCGGCTATTCGCAGCACCCCGCCAACGGAGTTCACCTCAATTTACTGA

Protein sequence :
MRSKPVPSVRNRYLLIGDLLLIVLSVLGSYALRFELGNFFFFYLPSAYWMAGAALIIKPLVYYFFGLYRRMWIYASIREA
LMVVAASVTASALLAATMIALTSFRLFVGFPRSVLIIDFFLSVFAAGGLRFTLRLLAESRINQAIQEGAGLRQPQKVLIV
GAGDAGALVVRELQKNPQLNLIPIGFLDDNPAKQRQQIYGVPVVGTLSDLEKVIDQTRAQQVIIAIPSAAGRVVRLVADA
CRAKGVPFRTMPGIYELLGGTVSVSRLREVDITDLLRRNPVQIDESLVGATLSGKVVLITGAGGSIGRELCRQVARWGPS
ELILLGHGENSIFEALMELRENFPSLLFRPVIADVRDYGRIRNVFLRHRPEIVFHAAAHKHVPLMELNVEEAVTNNVLGT
MNVVSAALESGVERLVMVSTDKAIRPANIMGATKRLAEMIVLDAARRSGRSYSVVRFGNVLGSRGSVVPLFKRQIARGGP
VTVTHPEMRRYFMTIPEAVHLVLQASAMGEGGETFVLNMGEQIRILDLAEDLIRLSGLEPGKDIEIVFTGIRPGEKLSED
LWDEGVPIERTEHPEIFRVNSETPELSGEELRSLVEQVLRLAQEGDTHTLINLLDETIPGAAIRSTPPTEFTSIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-93 44
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-90 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_22620 YP_004174888.1 putative polysaccharide biosynthesis protein VFG0029 Protein 6e-78 43
ANT_22620 YP_004174888.1 putative polysaccharide biosynthesis protein VFG1300 Protein 2e-89 41