Gene Information

Name : ANT_20970 (ANT_20970)
Accession : YP_004174723.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2348173 - 2349015 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence : 
ATGACAAAGTCATCTCAGGGTCTTTTCTTCTTTCCGCCCCACCTTCCCCATCAGACCGATAAACCCATCGTCAGTGTGAA
AGGGGTAAGTCTGATATATTCCAACGGACCAGCACTGGAAAATATCCATTTTGACGTGGTTGTCGGAGAAAGACTGGCAG
TGATTGGACCCAACGGCGCAGGGAAAAGCACCCTGTTTAAGATCATTGCGGGTGTCCTGCCCCCTACCGAGGGACGTGTG
GAAGTTTACGGGAATGAACCGGGAAAACACATCTGCATTGCCTATGTGCCACAACGAAGTCAGGTAGATTGGTCGTTTCC
GGTCAGCGTGGCTGATGTGGTGATGATGGGACGGATTGGTAAAATCGGCATATTCCGCCGTCCCACCAGAAAGGACTGGG
AGATCGTCTATCAAGCGCTGGAAACCGTGCAATTGCAAGACTATGCGAAACGTCAAATCCGCCAGTTGTCTGGTGGACAA
CAGCAACGGGTGTTCATCGCCCGCGCTTTAGCTCAGGAAGCGGAATTAATCCTGATGGATGAGCCATTTACGGGGTTAGA
TTTCCCTGCCCGGCAAACCATTCTCAATATTCTGGACATTCTGAAAGAAAAACACGTGACCGTTCTGGTGGCTCTGCACG
ACCTGAAAACCGCCGCCGAGCATTTTGATCGCATTCTATTGTTAAATCATCGGCTCATTGCCATTGGTCAGCCCTCTGAG
GTGCTCATCCCCTCTCATCTGCTCTATGCCTACGGTGGACAATTGAGTTTGATACCTGCTGAAGAAGGTACCTGGGCAAT
GGAAGATACCTGTTGCGAGGAAGGAGAGCATTCCCATGCTTGA

Protein sequence : 
MTKSSQGLFFFPPHLPHQTDKPIVSVKGVSLIYSNGPALENIHFDVVVGERLAVIGPNGAGKSTLFKIIAGVLPPTEGRV
EVYGNEPGKHICIAYVPQRSQVDWSFPVSVADVVMMGRIGKIGIFRRPTRKDWEIVYQALETVQLQDYAKRQIRQLSGGQ
QQRVFIARALAQEAELILMDEPFTGLDFPARQTILNILDILKEKHVTVLVALHDLKTAAEHFDRILLLNHRLIAIGQPSE
VLIPSHLLYAYGGQLSLIPAEEGTWAMEDTCCEEGEHSHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-38 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-38 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-38 41
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-38 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_20970 YP_004174723.1 ABC transporter ATP-binding protein BAC0400 Protein 2e-43 48
ANT_20970 YP_004174723.1 ABC transporter ATP-binding protein BAC0440 Protein 1e-41 43
ANT_20970 YP_004174723.1 ABC transporter ATP-binding protein BAC0350 Protein 8e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_20970 YP_004174723.1 ABC transporter ATP-binding protein VFG0526 Protein 7e-39 41