Gene Information

Name : ANT_20410 (ANT_20410)
Accession : YP_004174667.1
Strain : Anaerolinea thermophila UNI-1
Genome accession: NC_014960
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2295407 - 2296087 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGTCCACCGTGTTGCTCATTGAAGATGAAACTGAACTTGCCCGAGTTGCCCAGTCCTATTTGGAAAAGGCAGGCTTTCA
GGTGATTCTGGCTTCCAGGGGAGATACAGGTTTATCTTTGTTCAGGCAACATAAACCTGATCTGGTGTTGCTTGACCTGA
ATCTCCCCGGCATGGATGGTCTGGATGTTGCCCGCGAGATTCGCCGCCAGAGCGATGTCCCTCTCATTATGGTTACTGCA
CGGGTAGAAGAGACAGACCGTTTGATTGGGTTGGAATTGGGAGCAGATGATTACATCGTCAAGCCCTACTCGGTACGGGA
ACTGGTTGCCCGGGTTCGAGCCGTCTTGAGACGCTTTAATCGTTCGTCGGGTGGATCACAAATTCTCCGGGAAGGCAATT
TGGAAGTGGATTTGGATACCCACACGGTTAAACGTGGAGATGAAGAGATTTTCCTTACCCCTACAGAATTTCAACTGCTC
TCTACGTTAATGGCACAACCTGGCAGGGTTTTTACCCGTTTGCAATTGCTGGAAGCCATTCAAGGGGTAGCCTATGAAGG
CTATGAACGTACCATTGATGCCCATATCAAGAACTTGAGAGCCAAAATTGAGGAAGACCCACACCATCCGCATTATGTTG
AGACTGTTTTTGGTGTAGGTTATCGGTTTCGCAAAGGATAA

Protein sequence :
MSTVLLIEDETELARVAQSYLEKAGFQVILASRGDTGLSLFRQHKPDLVLLDLNLPGMDGLDVAREIRRQSDVPLIMVTA
RVEETDRLIGLELGADDYIVKPYSVRELVARVRAVLRRFNRSSGGSQILREGNLEVDLDTHTVKRGDEEIFLTPTEFQLL
STLMAQPGRVFTRLQLLEAIQGVAYEGYERTIDAHIKNLRAKIEEDPHHPHYVETVFGVGYRFRKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP001918.1.gene3444. Protein 6e-39 49
ANT_20410 YP_004174667.1 OmpR family two-component response regulator NC_002695.1.916589.p Protein 2e-39 49
ANT_20410 YP_004174667.1 OmpR family two-component response regulator BAC0039 Protein 3e-39 48
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP000647.1.gene2531. Protein 2e-39 48
ANT_20410 YP_004174667.1 OmpR family two-component response regulator BAC0596 Protein 8e-40 48
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP000034.1.gene2186. Protein 3e-39 48
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP001138.1.gene2239. Protein 8e-40 48
ANT_20410 YP_004174667.1 OmpR family two-component response regulator NC_011595.7057856.p0 Protein 3e-42 46
ANT_20410 YP_004174667.1 OmpR family two-component response regulator NC_010410.6002989.p0 Protein 3e-42 46
ANT_20410 YP_004174667.1 OmpR family two-component response regulator NC_010400.5986590.p0 Protein 6e-42 46
ANT_20410 YP_004174667.1 OmpR family two-component response regulator AE000516.2.gene3505. Protein 2e-36 45
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP004022.1.gene1676. Protein 5e-34 43
ANT_20410 YP_004174667.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 9e-34 42
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP000034.1.gene3671. Protein 2e-32 42
ANT_20410 YP_004174667.1 OmpR family two-component response regulator CP000675.2.gene1535. Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANT_20410 YP_004174667.1 OmpR family two-component response regulator VFG1702 Protein 3e-33 41