Gene Information

Name : Deima_0671 (Deima_0671)
Accession : YP_004169993.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Virulence
Product : ABC transporter periplasmic protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 760835 - 761728 bp
Length : 894 bp
Strand : -
Note : COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: mrb:Mrub_2422 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; PFAM: Periplasmic binding protein

DNA sequence :
ATGAAACGACTCCTCCCGCTGCTCCTGACCGCCGCGCTCGGCACCGCCGCCGCGCAGGACACCTCCTGCACCGGCCGCAC
CGTGAAACACGCCATGGGCACCACCTGCGTGCCCAACAGCCCGAAACGCGTCATCGTCCTCGACACCGGCGAACTCGACA
GCGTCCTCGCGCTCGGCGTGAAACCCGTCGGTGCCGTCACGGCGCTCGGCAGCGGCTTCCCCACCTACCTCAAGGGGCGC
ACCGACGGCGTCGCCGACGTCGGCACCATCCAGCAGCCCAGCCTGGAACGCATCCTGGCGCTCAAACCAGACCTGATTCT
CAGCAGCAAACTCCGGCACGGGAACCTGTACGCGCAGCTCAGCCGCATCGCGCCGACCGTCATGGCCGAAACGGTCGGGG
TCGTCTGGAAGGACAACCTCAAACTCGACGCCCGCGCGCTCGGCCGCGAAGCGCAGGCGAACAAACTCCTCTCGACCTAC
TACGCGCGCCTCAAGAAACTGCAGGTCCGCGTGGACCGCAAACGCACCACCATCAGCGTCCTGCGCTTCGTGCCCGGGCA
GGTGCGCCTGATGCAGCGTGCGAACTTCATCGGCACCATCCTTGACGACGCCGGCCTGCTGCGCCCCGCCACGCAGCGCA
AGGACACCTTCTCGGACGTTATCAGCGCCGAGGGCCTGCCCGCCGCGGACGGCAGCGTGCTGTTCTACAGCACCTACGGT
CCCGCCGACGCCACCGACCAGCGCGCGTTCCTGAGCAGTCCCCTGTGGGCGCGCCTCAACGCCGTGCGGAACAAGCGGGC
CTTCGCGGTGAACGACGACCACTGGTTCCTGGGCATCGGCATTCTCGCCGCGAACCGCGTCCTCGACGACCTCGAACAGT
ACCTCGGGAATTGA

Protein sequence :
MKRLLPLLLTAALGTAAAQDTSCTGRTVKHAMGTTCVPNSPKRVIVLDTGELDSVLALGVKPVGAVTALGSGFPTYLKGR
TDGVADVGTIQQPSLERILALKPDLILSSKLRHGNLYAQLSRIAPTVMAETVGVVWKDNLKLDARALGREAQANKLLSTY
YARLKKLQVRVDRKRTTISVLRFVPGQVRLMQRANFIGTILDDAGLLRPATQRKDTFSDVISAEGLPAADGSVLFYSTYG
PADATDQRAFLSSPLWARLNAVRNKRAFAVNDDHWFLGIGILAANRVLDDLEQYLGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 5e-57 48
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 5e-57 48
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-57 48
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-57 48