Gene Information

Name : Deima_0004 (Deima_0004)
Accession : YP_004169333.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 4484 - 5908 bp
Length : 1425 bp
Strand : +
Note : COGs: COG0469 Pyruvate kinase; InterPro IPR001697: IPR015793: IPR015795; KEGG: dge:Dgeo_0005 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: P

DNA sequence : 
ATGAAGCACTTTGATCGCGCCACCAAGATCGTCGCGACGATCGGCCCGGCCAGCCGCAACCCGGAAACCCTGGAGCGCAT
GATTGACGCGGGCCTGAACGTCGTCCGCATGAACTTCAGCCACGGCGACCAGGAAGACCACCGCCAGACGTACGACATGG
TCCGCGCCCTCGCCAAGAAAAAAGGCGTGAGTATCGGCATCCTGCAGGACCTGCAGGGGCCTAAGATCCGCGTGGGCCGC
TTCAAGGACGGCCCGGTCACGCTGAGCGCTGGCCAGCCGTTCATCATCACCATGGACGACGTGGAAGGCACCGCCGAGCG
CGTCAGCAGCACTTACAAGGGCCTCGCGCTCGACGTGCGCCCCGGCATGGCACTGCTGCTCGACGACGGCAACATGGCCC
TTGAAGTCACTAAGGTGCAGGGCCACGACGTGCACACCGTCGTGACGGTCGGCGGCGTCCTGAAGAACAACAAGGGCATC
AACGTCCCCGAAGCGGACCTGACGGTCCCCGCGCTCAGCGACAAGGACGTCGAGGACCTGACCTTCGGCGCGGAGCTCGG
CGTGGACTGGGTGGCGCTCAGCTTCGTGCGCAGCCGCGACGACCTGCTGCTCGCCCGCCACTACCTCGCGCGCGCTGGCA
GCCGCGCGAAACTGATGGCGAAAATCGAGAAGCCGCAGGCCGTGGAACGCTTCGACGACATCCTCAAGGAGTGCGACGGC
GTGATGGTCGCGCGCGGCGACCTGGGCGTCGAGATGCGCCCGGAACAGGTGCCGATCATCCAGAAACGCCTGATCCGCGC
GTGCCGCGAAGCTGGCAAGCCGGTCATCACGGCCACGCAGATGCTCGAGAGCATGATCAACCTGCCGCGTCCCACCCGCG
CGGAAGCGTCCGACGTGGCGAACGCCATTTTCGACGGCACTGACGCCGTGATGCTCAGCGCCGAGAGCGCCGCCGGCCTG
TACCCGGTCGAAGCCGTCAGCATGATGGACCACATCGCCCGCGAAGCGGAAGCCAGCGCCGAGTACAAGATCATGCAGGC
CCAGGAGATCGACACGACGCTCGCGCAAGACGCCATCGCGCAGGCTGCGTGCAACATCGGTGAGCGTATGGACCTCGCGG
CCATCGTGACGTTCACGAAGACCGGCGGGGCCGCCACGCGCGTCGCGAAGAACCGCCCGAAGCTGCCGATTCTGGCGCTC
ACGCCCAACGAGCAGACGCGCAGTCAGCTGGCGCTCTCGTGGGGCATCGTGCCGATCCTCAGCGAGGACCCGCACGACAC
CGACGACATGGTGCGCATCGCGAACAACACCCTGCGCGACAGCCGCCTCGCCGCGGTCGGCGAGCGGTACGTCATCACGG
CGGGCGTGCCGTTTGGCGTGGCGGGCAGCACGAACATGCTGCGCGTCGAGAAACTTCGGCAGTAA

Protein sequence : 
MKHFDRATKIVATIGPASRNPETLERMIDAGLNVVRMNFSHGDQEDHRQTYDMVRALAKKKGVSIGILQDLQGPKIRVGR
FKDGPVTLSAGQPFIITMDDVEGTAERVSSTYKGLALDVRPGMALLLDDGNMALEVTKVQGHDVHTVVTVGGVLKNNKGI
NVPEADLTVPALSDKDVEDLTFGAELGVDWVALSFVRSRDDLLLARHYLARAGSRAKLMAKIEKPQAVERFDDILKECDG
VMVARGDLGVEMRPEQVPIIQKRLIRACREAGKPVITATQMLESMINLPRPTRAEASDVANAIFDGTDAVMLSAESAAGL
YPVEAVSMMDHIAREAEASAEYKIMQAQEIDTTLAQDAIAQAACNIGERMDLAAIVTFTKTGGAATRVAKNRPKLPILAL
TPNEQTRSQLALSWGIVPILSEDPHDTDDMVRIANNTLRDSRLAAVGERYVITAGVPFGVAGSTNMLRVEKLRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-75 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-75 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-75 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-75 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_0004 YP_004169333.1 pyruvate kinase VFG0479 Protein 6e-76 45