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Name : Deima_2963 (Deima_2963) Accession : YP_004172257.1 Strain : Deinococcus maricopensis DSM 21211 Genome accession: NC_014958 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3134245 - 3136068 bp Length : 1824 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: ddr:Deide_20260 capsular polysaccharide biosynthesis protein CapD; membrane protein; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: capsular polysaccharide biosynt DNA sequence : ATGAAGCCGACCACCAGTAAGTTCCTGATCGATCTCGCCCTCTGGAGCGCCGCTGGACTGCTGGCCTACGGATTCCGCAA GCCGGAACTCCTGAGTCGCGGCGTGCCCAGCAACGTCCTCGGGTACCTGCTGCTCAGCTTGCTGGTCATGGCCGCTCTGG AAACGTACTACAGCCTCCACCGGCAATCATGGCAGCGCGTCGGCATCCTGGACCTGCAGCTTCTGGGCCGCGCCGTCACT CTCGCCACCCTGGTGATGTTCGCCCTAGGGTTCATTCTTCAGACCTGGCTCCAACTTCCCCGGAGTGTGCCCGTGATGGC CGGCGTGCTCGGCCTGCTCTTGATGGGGGGAATCCGGTTGGTCGCACGCTTGACCAGCGAGCGCGTCCGCCTGCAGGCGG CACCTCAACGCCAACGGGTCCTGATTGTCGGCGCGGGCGACGCCGGCAGCCTGATTGCGCGCGAGATGCAGCGCCACCCG GAAGCGGGCCTCGAACCCATCGGTTTCTTGGACGACGAACCCCGAAAAATCCGGGGGCGCGTGGTGGGCCTCCCAGTTTT CGGCCCCATAGACGACCTTGTCACCGTCGCCAAACGCGAGCAGGCGCAGGAGATCCTCATTGCCGTGCCCTCCGCGGACG GTCAGTTCGTCCGCCGCGTGGTCAGTCTGGCGCGCGATACCGGTCTGCGCTACCGCATTATTCCCGGCATGTTCGAGATT CTCAGCAGTGACGTCACCATCAGCCAGATCCGCGACGTCAACCTCGAAGATCTCCTGCGCCGCCCACCCGTCCGGCTCAA CACCGCAGAAATCGCCAGTTACCTCAAAGGACGGGTGATTCTGGTGACCGGCGCGGGCGGCAGTATCGGTTCCGAGATCA TCCGCCAACTGGCCGTTTTCGGTCCCTCGACCGTTTTGCTGTTCGGACGTGGTGAAAACAGCATCTTCTCGATTCAACAG GAGCTGCTGCGGACATGGCCCGAAATTGAGCAGGTCGGCCTGATTGGGGACGTCCGTGACGCCGCGCGCCTCCGCGCCGT ATTCGAACGCTACCGCCCCGAAGTCGTCTTCCACGCCGCAGCGCACAAGCATGTGCCTCTGATGGAGGAAGCGCCTTCCG AAGCCATCCTGAACAACGTCATCGGTACGCAGAACGTCGTCGACCTGTGCCTGGAGTTCGGTGTGAGCCGTCTGGTGAAC ATCTCGACGGATAAGGCCGTCAACCCGACCAGCGTGATGGGAGCGTCCAAGCGCGTGGCCGAAATGGTCGTTTCCGCAGG GGCGGCGCGCGCGCGGGACGCCCAGGCGTTCGTTTCGGTGAGGTTCGGGAACGTTCTGGGCAGCCGAGGGAGTGTCGTGC CGACCTTTATGGCGCAGATCCGTGCTGGCGGACCCATTACCGTCACCCACCCCGAGATGGTGAGGTACTTCATGACCATT CCAGAAGCCGCGCGGCTGGTCTTGCAGGCAGGTGGCCTGGCGGAAAACGGAAAAGTGTACGTCCTGGATATGGGTGAGCC AGTCAAGATCGCGGACCTGGCCCATGACGTGATCCGACTGAGCGGTGCGTGGAATGTCGACGTGGTCTACAGCGGTATCC GTCCGGGCGAGAAACTTTATGAGGAGTTACTGACCACGAGCGAAGGCGCAGACGCCACGACGCACAGCGAAATATTCAGT GCTCGACTGGCGCAGGTCAACGAGTATCAGATCATCGATAACGTGCAAGCATTACGTTCTGCTGCGCAGAAAAACGATGA ACACAAAATTCGACATTTACTCTCAGAGATGATTCCTGAAAATAAATTCGGGAGCATACGATAG Protein sequence : MKPTTSKFLIDLALWSAAGLLAYGFRKPELLSRGVPSNVLGYLLLSLLVMAALETYYSLHRQSWQRVGILDLQLLGRAVT LATLVMFALGFILQTWLQLPRSVPVMAGVLGLLLMGGIRLVARLTSERVRLQAAPQRQRVLIVGAGDAGSLIAREMQRHP EAGLEPIGFLDDEPRKIRGRVVGLPVFGPIDDLVTVAKREQAQEILIAVPSADGQFVRRVVSLARDTGLRYRIIPGMFEI LSSDVTISQIRDVNLEDLLRRPPVRLNTAEIASYLKGRVILVTGAGGSIGSEIIRQLAVFGPSTVLLFGRGENSIFSIQQ ELLRTWPEIEQVGLIGDVRDAARLRAVFERYRPEVVFHAAAHKHVPLMEEAPSEAILNNVIGTQNVVDLCLEFGVSRLVN ISTDKAVNPTSVMGASKRVAEMVVSAGAARARDAQAFVSVRFGNVLGSRGSVVPTFMAQIRAGGPITVTHPEMVRYFMTI PEAARLVLQAGGLAENGKVYVLDMGEPVKIADLAHDVIRLSGAWNVDVVYSGIRPGEKLYEELLTTSEGADATTHSEIFS ARLAQVNEYQIIDNVQALRSAAQKNDEHKIRHLLSEMIPENKFGSIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-86 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-87 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Deima_2963 | YP_004172257.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 3e-86 | 45 |
| Deima_2963 | YP_004172257.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-73 | 42 |
