Gene Information

Name : Deima_0288 (Deima_0288)
Accession : YP_004169614.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 335724 - 336698 bp
Length : 975 bp
Strand : +
Note : COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: dra:DR_B0122 iron ABC transporter, permease; PFAM: ABC transporter permease; SPTR: Iron ABC transporter, permease; PFAM: FecCD transport family

DNA sequence : 
GTGGCCGTGCTGCTGCCGCTGCTGCTCGCGGCGTTGCTGCTGCTCGCCGTGGTCGCCCTCGGTCTGGGGGCCGTGCGCAC
CCCTCCCGCCGACGTGCTCCGCGCCCTGACCGGTGCCGGCGACGAGCTGACCAGCCGCATCCTGCTGGAACTGCGCCTGC
CGCGCGTGCTCGTCGCGGCGCTCACCGGCGCGATGTTCGCGGCGTCCGGCGTGATCCTGCAGGGCGTCGTCCGCAACCCG
CTCGCGTCCCCGGACCTCGTGGGCGTCGGCGCGGGCGCCGGGCTGGCCGCGACGGTGCTGCTGCTCGCCGCGCCCGCCGC
GCCCGCGTGGGCGCTGCCGGTCGGGGCGTTCGTGGGCGCGTGGCTGGGCTTCGCGGCAGTGTACCTGCTGTCGCGCGGGC
CGGGCGGCCTGAGCCCCGCGCGGCTCGCGCTGATCGGCATTGCCGTCGGGTCGGCGCTCGGCGCGATGCAGCAGCTGGTC
ATCGTCCGCGCGCCCGACGGCGTCGCGTCCGCGCTCGCGTTCCTGGTCGGCACGGTGTACGGCGCCGACTGGCCGCGCGT
GACGCGCGTGCTGCCGTGGGCGGCGCTGCTGCCCGCTTCGATGCTGCTCGCCCGCCGACTGGACGTCCTGTCGTTCGGCG
AGGACATCGCCACGGCCCTCGGCACGCGCGTGAACGTCGCGCGCGGTGTCGCCCTGAGCGTCGCCGTGGGCCTCGCCGCT
GCTGCCGTCACCGGCAGTGGCATTCTGGGGTTCGTGGGGCTGATCGCGCCGCACCTCGCGCGGCTGCTCGTCGGCGGGCT
GCACGCGCGGCTGCTGCCGCTCGCCATGCTGCTCGGCGCGCTGCTCGCGCTCGGCGCGGACACCGTCGGGCGCGCCCTGC
TCCCCCCGCTGGAAATCCCGGCGGGGATCGTCACGACACTGATCGGCGCGCCGTACTTCCTGTGGTTGCTGCGCCGTCAA
GGAGGGAAGGCATGA

Protein sequence : 
MAVLLPLLLAALLLLAVVALGLGAVRTPPADVLRALTGAGDELTSRILLELRLPRVLVAALTGAMFAASGVILQGVVRNP
LASPDLVGVGAGAGLAATVLLLAAPAAPAWALPVGAFVGAWLGFAAVYLLSRGPGGLSPARLALIGIAVGSALGAMQQLV
IVRAPDGVASALAFLVGTVYGADWPRVTRVLPWAALLPASMLLARRLDVLSFGEDIATALGTRVNVARGVALSVAVGLAA
AAVTGSGILGFVGLIAPHLARLLVGGLHARLLPLAMLLGALLALGADTVGRALLPPLEIPAGIVTTLIGAPYFLWLLRRQ
GGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 3e-20 43
DIP0584 NP_938960.1 iron transport system membrane protein Virulence Not named Protein 3e-20 43
ciuC YP_005681254.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-18 41
ciuC YP_005683345.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-18 41
ciuC YP_003783390.1 iron ABC transporter permease Virulence PiCp 4 Protein 2e-18 41
ciuC YP_005685431.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_0288 YP_004169614.1 ABC transporter BAC0163 Protein 2e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_0288 YP_004169614.1 ABC transporter VFG1043 Protein 2e-20 43