Gene Information

Name : Deima_2793 (Deima_2793)
Accession : YP_004172087.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.8.1.4
Position : 2976395 - 2977801 bp
Length : 1407 bp
Strand : +
Note : COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR006258; KEGG: ddr:Deide_20540 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreduct

DNA sequence :
ATGGACGCATTCGATGTACTCGTGATCGGTGGTGGCCCGGCGGGCTACGTGGCCGCAATCCGCGCGGCGCAACTCGGCTT
CAAAACGGCGTGCGTGGACGCCTTCGAACGAAACGGCAAGGCGTCCCTGGGCGGCACGTGCCTCAACGTCGGCTGCATTC
CCAGCAAAGCTATGTTGGACAGCAGCGAGAAATTCGAGATGATCACCCACGAAGCGGACGAACACGGCATCGTCGTCGAC
GGCGCGCGCGTGGACCTGAACAAGATGCTTGCCCGCAAGGACGCCGTCGTGGACAAGCTCACGGGCGGCATTCAGTTCCT
GTTCAAGAAGAACAAGATCAAGAGCTACCACGGGTACGGTCGCCTCGTGCGCCGCGAAGGCGACGCGTGGATCGTGGACG
CCGCCGGTGAGGAAGTCAGCGCGAAGAACGTCATCGTCGCGACGGGCAGCAACCCGCGCGCGCTGCCGCTCGCGCCGTTC
GGCGGACACATCGTCGAGAACAGCGGCGCGCTCGCCCTCACCGAAGTGCCGCAGCGGCTCGGCGTGATCGGCGCTGGCGT
GATCGGCGTGGAGCTCGGCAGCGTCTGGCGCCGCCTGGGCGCGCAGGTCACCGTTCTCGAGGCGCTGCCTGGTTTCCTGC
TGCCCGCCGACGACGCGGTCAGCAAGGAAGCCCTCAAGCACCTCAAGAAGCAGGGCCTCGACTTCCACTTCAGCGTGAAC
GTCAAGGACGTGCAGCAGAGCGACGCGGGCGTCACCGTCACGTACGAGGAGAATGGCCAGAGCGTCACCGCGCAGTTCGA
CAAGCTCATCGTCTCCATCGGTCGCGTGCCGAACACGCAGGGTCTGGGCGCGCAGGATGTCGGCCTGACGCTCGACGAGC
GCGGCTTCGTGAAGATTGACGATCACTATCGCACGAACCTCCCGGGCGTGTATGCCATCGGTGACGTGGTGGGCGGCGCC
ATGCTCGCCCACAAGGCCGAGGACGAAGGCGTCGCCGTCGCGGAAATCATCGCGGGGCAGGCCGGGCACGTGAACTACGA
CGCGATCCCCTGGGTGATTTACACCAGCCCGGAAATCGCGTGGGTGGGCCTCACGGAGCAGGGTGCCAAAGCGCAGGGTC
TCGAGGTGCGCACCGGGCAGTTCCCGTTCGCCGCGAACGGCCGCGCGCTCGGCCACAACGACTCGCGCGGTTTCGTGAAG
GTCGTCGCGGACGCCAAGTCTGACAAGATTCTCGGCGTGCACATGGTGGGCCCGAACGTCAGCGAACTGATCGCCGAGGC
CGTGAGTGTCATGGAGTTCGGCGGGAGCGCCGAGGACCTGGCGCGCACCGTGCACGCGCACCCGACGCTCAGCGAGGCCG
TCAAGGAAGCGGCGCTCGCGGTGGACAAGCGGGCGCTGCACGCCTAA

Protein sequence :
MDAFDVLVIGGGPAGYVAAIRAAQLGFKTACVDAFERNGKASLGGTCLNVGCIPSKAMLDSSEKFEMITHEADEHGIVVD
GARVDLNKMLARKDAVVDKLTGGIQFLFKKNKIKSYHGYGRLVRREGDAWIVDAAGEEVSAKNVIVATGSNPRALPLAPF
GGHIVENSGALALTEVPQRLGVIGAGVIGVELGSVWRRLGAQVTVLEALPGFLLPADDAVSKEALKHLKKQGLDFHFSVN
VKDVQQSDAGVTVTYEENGQSVTAQFDKLIVSIGRVPNTQGLGAQDVGLTLDERGFVKIDDHYRTNLPGVYAIGDVVGGA
MLAHKAEDEGVAVAEIIAGQAGHVNYDAIPWVIYTSPEIAWVGLTEQGAKAQGLEVRTGQFPFAANGRALGHNDSRGFVK
VVADAKSDKILGVHMVGPNVSELIAEAVSVMEFGGSAEDLARTVHAHPTLSEAVKEAALAVDKRALHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 6e-80 45