Gene Information

Name : Deima_2473 (Deima_2473)
Accession : YP_004171773.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2662292 - 2662480 bp
Length : 189 bp
Strand : +
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: dra:DR_2454 PbsX family transcriptional regulator; PFAM: Helix-turn-helix type 3; SPTR: Transcriptional regulator, PbsX family; PFAM: Helix-turn-helix

DNA sequence :
GTGTACGGCGTAGACTACGGCCTGTTCGCTTTCACGCAGGCCGACCTCGCCCAGCACATGCAGGTGTCCCGGCAGACCAT
CAATGCCCTCGAAACCGGCAAGTACGACCCCAGCCTGCCGCTCCCCTACAAACGCGCGCGGCTGTTCGGCGTGCGCGTCG
AGGACGTCTTCCCCGACGAAGCCCCCTGA

Protein sequence :
MYGVDYGLFAFTQADLAQHMQVSRQTINALETGKYDPSLPLPYKRARLFGVRVEDVFPDEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-08 48
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-04 46
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-05 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_2473 YP_004171773.1 XRE family transcriptional regulator VFG2168 Protein 3e-05 46
Deima_2473 YP_004171773.1 XRE family transcriptional regulator VFG2175 Protein 3e-05 46