Gene Information

Name : Deima_0170 (Deima_0170)
Accession : YP_004169499.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 195383 - 196546 bp
Length : 1164 bp
Strand : -
Note : COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: asa:ASA_2347 methionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-synthase; SPTR: Methionine gamma

DNA sequence :
ATGAAACCCCGTACACTCAGCGTTCACGCCGGCCAGCACCCTGACCCGCAAACCGGCGCGCTCACCACGCCCGTCTACCA
GAGCAGCACCTTCAGCTACTTCACGGCCGAGCAGGGCCGTCAGCGGTTCGCCGGTGAAACCCCAGGGTTCTTCTACAGCC
GCATGGGCAACCCGACCACGCACACCCTCGAAGCGAAACTCGCAGCGCTCGAAGGCGCCGAGGACGCCCTGGCGGTCGCC
AGCGGCATGGCCGCGCTCAGCAGCGTCGCGTACGGCCTGCTCAGCCACGGCGACGAGGTCGCGTTCATCGATCCGCTGTA
CGGCGGCAGCGACGCATTCCTGCAAAACACCCTCCCCCGCGCCGGCATGCACGTCACCCGCTACCGCGACGAGCACGACC
TCGCGCAGAACATCAAGCCGAACACGCGCCTGATCATCTTCGAGCCGCTCACCAACCCGACGTTGACGGTCATCGACACG
GACGCCGTCGTGGCCGTCGCGCGGCGCGTCGGCGCGCTCACCCTCGCGGACAACACCTTCCTGACGCCGTACCTGTTCCG
GCCGCTGGAGCGCGGCGTGGACCTCGTGATGCATTCCGCCACGAAGTACCTCAGCGGCCACGGCGACCTGATTGCCGGCG
TCGTCGCGGGTCGGCGCGAGCTGCTCACCCCCATTCGTACCATCGGCCTCAAGCACCTGGGCGCGCCGCTCGGCCCGCAG
GAGGCGTACCTGCTGCTGCGCGGCATCAAGACGCTGCCGCTGCGGATGGACGCGCACAGCGAGGCCGCGCTTGCCGTCGC
GGAGTACCTGAGCGCACACCCGAAGGTCACACGCACGTACTACCCGGGCCTGAGCAGCCACCCGGGGCACGCGACCCTCG
CGGCGCAGGTCGCGCAGTTCAGCGGCGTGATGGCCATCGACATCGGCGGGGACGCGGGCGCGGCCGCGCGGTTCCTGGAT
CACCTGCAGCTGTTCGTGCAGGCCGTGTCGCTCGGCGATGTGGAGAGCCTCGCGTGCCATCCAGCCACGACGACGCACGC
GGCCATGAAGGCCGAGCACCGCGCGGGCGCCGGCGTGACAGACGGCCTGGTGCGCCTCAGCATCGGCATTGAGGACGCCG
ACGACCTGATCGCGGACCTCGCGCAGGCCCTCGAGTACGTCTGA

Protein sequence :
MKPRTLSVHAGQHPDPQTGALTTPVYQSSTFSYFTAEQGRQRFAGETPGFFYSRMGNPTTHTLEAKLAALEGAEDALAVA
SGMAALSSVAYGLLSHGDEVAFIDPLYGGSDAFLQNTLPRAGMHVTRYRDEHDLAQNIKPNTRLIIFEPLTNPTLTVIDT
DAVVAVARRVGALTLADNTFLTPYLFRPLERGVDLVMHSATKYLSGHGDLIAGVVAGRRELLTPIRTIGLKHLGAPLGPQ
EAYLLLRGIKTLPLRMDAHSEAALAVAEYLSAHPKVTRTYYPGLSSHPGHATLAAQVAQFSGVMAIDIGGDAGAAARFLD
HLQLFVQAVSLGDVESLACHPATTTHAAMKAEHRAGAGVTDGLVRLSIGIEDADDLIADLAQALEYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_0170 YP_004169499.1 cystathionine gamma-synthase BAC0207 Protein 4e-59 49