Gene Information

Name : Deima_1619 (Deima_1619)
Accession : YP_004170933.1
Strain : Deinococcus maricopensis DSM 21211
Genome accession: NC_014958
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1746264 - 1746458 bp
Length : 195 bp
Strand : +
Note : COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: pfl:PFL_4031 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: DNA-binding protein; PFAM: Helix-turn-helix

DNA sequence :
ATGAACAACCGCATCCGCGTCCTGCGCACCGAACGCGGCTGGACCCAGGCCGACCTCGCCAACCACCTCGACGTCTCCCG
ACAAACCGTCAACGCCCTCGAAACCGGCAGGTACGACCCCAGCCTCCCCCTCGCCTTCCGCATCGCCCGCACCTTCGCCC
TCCCCCTCGAAGCCATCTTCACCCCCGACGACTAA

Protein sequence :
MNNRIRVLRTERGWTQADLANHLDVSRQTVNALETGRYDPSLPLAFRIARTFALPLEAIFTPDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-10 45
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-07 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-08 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deima_1619 YP_004170933.1 XRE family transcriptional regulator VFG2168 Protein 3e-08 45
Deima_1619 YP_004170933.1 XRE family transcriptional regulator VFG2175 Protein 3e-08 45