Gene Information

Name : Nitsa_0904 (Nitsa_0904)
Accession : YP_004167913.1
Strain : Nitratifractor salsuginis DSM 16511
Genome accession: NC_014935
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 906318 - 907271 bp
Length : 954 bp
Strand : +
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: sun:SUN_0634 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal do

DNA sequence : 
GTGGATAAGTTGACCATCGTGACCCGGGCGAGCCAACTGGCCCTCTGGCAAGCCTATCACATCAAAGATCGGATCGAGAA
GGCCCGCCCCGAACTGGAGGTGGAGCTGATGGAGATCACCAGCCGGGGAGACAAGATCCTGGACCGTCCCCTCGCTCTGG
TGGGCGGCAAGGGGCATTTCACCAAGGAGTTGGAGGATGAAATGCTCGCGGGCCGGGCGCAGATGGCTGTCCACTCCCTC
AAAGACGTGCCTACCTTCATCCCCGAAGGCTTGGAGCTGGCGGCGATTACCGAACGCCAGGATCAGAGCGATGTCTTCCT
CTCCCATCGCTTCAGCTCTCTGGAAGCTCTGCCCGAGGGAGCCGTGGTGGGGACGACGAGCCTGCGGCGCCGGATGCAGT
TGCTCCAGCGCCGCCCCGATCTGATCGTGAAGGATCTGCGGGGCAATGTCAATACCCGCCTGCGCAAGCTGGCAGAAGGG
CAATATGACGCCATCATCCTCGCCTACATCGGTTTGGCGCGCCTCGATCTGCTCAAGGAGATCCCCCACGTCCAAAAGCT
GGAGTGGATGATCCCGCCCATGGGCCAGGCGGCCCTGGGGATCGAGATCCTCTCCGGAGACGAAGAGTTGCGGCATCTCG
CGATGGAACTGGATGATCCCGAGACCCATCTCTGCACCGAGATCGAGCGGGAATTCGTGGCGGCGGTGGGGGCAGGATGC
TCGGCTCCCGTTGCGGTCAATGCCCGTATTATCGATGGTGAATTGGACTTGCGTGCGATGCTGGGCTATCCCGACGCCAG
CGAAGTGCTCTACGAGGAGCTGGTGCTCCCGATGGAAGAGGCCACGGGTGCGGGCAAGCGCCTGGCCGAGAAGATGATCG
CCGACGGAGCGCTGGAACTTCTGGCCGAGGCGGAAAAACGCGCTTTCAAAGAGGAACGCCCCGAACGCCTCTGA

Protein sequence : 
MDKLTIVTRASQLALWQAYHIKDRIEKARPELEVELMEITSRGDKILDRPLALVGGKGHFTKELEDEMLAGRAQMAVHSL
KDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEGAVVGTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEG
QYDAIILAYIGLARLDLLKEIPHVQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGC
SAPVAVNARIIDGELDLRAMLGYPDASEVLYEELVLPMEEATGAGKRLAEKMIADGALELLAEAEKRAFKEERPERL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-55 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-55 49