Gene Information

Name : Nitsa_0052 (Nitsa_0052)
Accession : YP_004167074.1
Strain : Nitratifractor salsuginis DSM 16511
Genome accession: NC_014935
Putative virulence/resistance : Virulence
Product : general secretion pathway protein g
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 58223 - 58636 bp
Length : 414 bp
Strand : +
Note : COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902: IPR010054: IPR013545: IPR000983; KEGG: sun:SUN_0024 type II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Type II secretion system protein G; TIGRF

DNA sequence : 
ATGAAAAAAGCGTTCAGTCTCTTGGAACTGTTGGTGGTCATTCTGATTCTCGGTATTTTGGCGGCGTTCGTGGCTCCCAA
CCTCATCGGAGCGGGTGAAAAGGCGAAGCGAGATCTGGTCTGTACCCAGATGAGCAGTGTGGCGCAGGCGCTCAAAATGT
TTAAGCTCGACAACGGCACCTATCCCGATACCGAAGAGGGGTTGCAGGCTCTGATGAAAAACCCCGATGCGAGCAAATAC
CCCAACTACTCCTCCAAGCCCTACCTCGAAAAACTCCCCAAGGACTCCTGGCGTCAACCTTTCGTCTATGTCAAGCAGGG
AGAGAAATTCGATCTGATAAGCCTTGGGGCCGATCGCAAAGAGGGCGGCGAAGGTGAAGGGGCCGACATCTACTACAGTC
AATGCCAAAAGTGA

Protein sequence : 
MKKAFSLLELLVVILILGILAAFVAPNLIGAGEKAKRDLVCTQMSSVAQALKMFKLDNGTYPDTEEGLQALMKNPDASKY
PNYSSKPYLEKLPKDSWRQPFVYVKQGEKFDLISLGADRKEGGEGEGADIYYSQCQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-18 47
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-18 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nitsa_0052 YP_004167074.1 general secretion pathway protein g VFG2050 Protein 5e-19 47
Nitsa_0052 YP_004167074.1 general secretion pathway protein g VFG0180 Protein 2e-16 45