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Name : Nitsa_0045 (Nitsa_0045) Accession : YP_004167067.1 Strain : Nitratifractor salsuginis DSM 16511 Genome accession: NC_014935 Putative virulence/resistance : Virulence Product : type II secretion system protein e (gspe) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 50985 - 52508 bp Length : 1524 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593; KEGG: sun:SUN_0031 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Type II se DNA sequence : ATGGAAGAGACAATGCGGATTCCCCAGCTAAAAGACCGAGACTTCGAACCTTGGTGGAGCGAAGAGATCGATCATAAAAC CGCCCTGAAGCATCATCTCCTCTTTGCACTGATCGATGAGAAACCCGTGGCAATCCTCCACCCGGAGCATATGGCCGAGG GACTCAACCAATTGGCACGTCTGGGACTGAAGATTCCGGCCTATCAGACCGATAAAGAGAGTTTTGACCGCCTCAAAAAC AAATTTCTCGAACTTCAAACCAGTAATGACTTCGAGGAGATGGAAACGGGTTCAGAGGAACTGATCGAAGCGGAGTCGGA GCTACTGGAGTTTATCCAGAACGCCCAGGATCTCCTCTCCAGCGAAGCCTCAGCGCCGGTCATCAAGCTGGTCAACTCCC TCTTTTTCCAAGCAATCAAGAAAGGAGCCAGCGACATCCATATCGAATCCCATGAGCGCAAGGGGGAAGTTCGCCTCCGA ATCGACGGGGCTCTCAAAAAACACTTGGACCTAGATCGGCGGATCACCCAGCTCGTGATCAACCGGATCAAGGTCATCTC CAGCCTCGACATCTCCGAAAAGCGGACCCCCCAGGATGGACGCACCCAGGTGAGCATCTCCGGCAATACACTGGATGTGC GGGTCTCGGTGCTTCCCACCTATCATGGCGAACGGGTGGTTATGCGGATCTTGATGCAGAGCGAGCATATCCCCGGTCTC GAAGAGCTCGGCTTTGATCCGGAGCTCACCGAAGCCTTCAATCGGCTCCTGACCCACTCCCACGGGATGATCCTCGTCAC CGGCCCCACCGGTTCGGGAAAATCGACGACCCTACACTCTTTTTTGCAAACCATTAACTCCCCCGATAAAAACCTCATCA CCATCGAAGATCCCGTCGAGTATAACGCTGAAAACATCAACCAGATCCAGGTCAACGAAAAGGTGGGGCTGACTTTCGCC TCGGGGCTGCGCTCCATTTTGCGCCAGGACCCCGATGTGGTGATGGTAGGGGAGATCCGGGACCGGGAAACCGCCCAGAT CGCCGTGCAGGCTTCTCTGACCGGGCACCTGATGCTCTCGACACTCCATACCAACGACGCCACCTCCGCCATCACCCGGC TTATGGATATGGGAATCGAGAGTTATCTCCTGGCTTCGACCCTCCTGGGGGTCCTGGCCCAGCGCCTGGCCCGACGCCTC TGCCCCCACTGCAAAGCTCCGACACGACTCGATCCGGCCCAGGCCCTCGAAGCGGGGCTCGATCCCGAAGGCCGGTATTA CCGGGCGGTAGGCTGCAGCCAATGCGACTACACCGGATACCGGGGACGCCAAGCCGTCGGAGAACTCTTCCTCATCGACG ATGAGGTCAAAAACATGATGGACAAAGGGCTCAACGACCACGAGATCCGTGAGCGGATGAAAGCGACCGGCATGCGGACC ATCTCCGACCGGCTCCGGGAGATGGTCATCGAGGGGAGCACCAGCTATGAAGAGGCCCTGCGGGTAGGGCTGATGGACGG GTGA Protein sequence : MEETMRIPQLKDRDFEPWWSEEIDHKTALKHHLLFALIDEKPVAILHPEHMAEGLNQLARLGLKIPAYQTDKESFDRLKN KFLELQTSNDFEEMETGSEELIEAESELLEFIQNAQDLLSSEASAPVIKLVNSLFFQAIKKGASDIHIESHERKGEVRLR IDGALKKHLDLDRRITQLVINRIKVISSLDISEKRTPQDGRTQVSISGNTLDVRVSVLPTYHGERVVMRILMQSEHIPGL EELGFDPELTEAFNRLLTHSHGMILVTGPTGSGKSTTLHSFLQTINSPDKNLITIEDPVEYNAENINQIQVNEKVGLTFA SGLRSILRQDPDVVMVGEIRDRETAQIAVQASLTGHLMLSTLHTNDATSAITRLMDMGIESYLLASTLLGVLAQRLARRL CPHCKAPTRLDPAQALEAGLDPEGRYYRAVGCSQCDYTGYRGRQAVGELFLIDDEVKNMMDKGLNDHEIRERMKATGMRT ISDRLREMVIEGSTSYEEALRVGLMDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-91 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-91 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nitsa_0045 | YP_004167067.1 | type II secretion system protein e (gspe) | VFG0182 | Protein | 9e-92 | 51 |
| Nitsa_0045 | YP_004167067.1 | type II secretion system protein e (gspe) | VFG2048 | Protein | 2e-92 | 50 |
| Nitsa_0045 | YP_004167067.1 | type II secretion system protein e (gspe) | VFG1876 | Protein | 2e-90 | 50 |
| Nitsa_0045 | YP_004167067.1 | type II secretion system protein e (gspe) | VFG2426 | Protein | 3e-71 | 45 |
