Gene Information

Name : Nitsa_1999 (Nitsa_1999)
Accession : YP_004168990.1
Strain : Nitratifractor salsuginis DSM 16511
Genome accession: NC_014935
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.12
Position : 1971516 - 1972571 bp
Length : 1056 bp
Strand : -
Note : COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: wsu:WS0025 UDP-glucuronic acid epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: PUTATIVE UDP-GLUCURONIC ACID EPIMERASE; PFAM: NAD dependent epimerase/deh

DNA sequence :
GTGAAAATTCTCGTCACCGGCACCGCCGGTTTTATCGGTTTTCACCTCGCCAAGCGGCTCCTGGAACGGGGCGATGAAGT
GGTGGGCCTGGACAATATCAACGACTACTACGATCCGAAAGTCAAGTACGGCCGCCTGCGGGAGACCGGGATCGAAGGGG
ATGAGGCGATCGAGTATGCCAAACCCGTTCAAAGCAGCCGCTACGAAAACTACCGTTTCATCAAGCTCAATCTCGAAGAC
CGTGCCGCCATCGAGGAACTTTTTGAAAAGGAGCGTTTCGATGCGGTGTGCAATCTGGCCGCCCAGGCGGGGGTGCGCTA
CAGCCTGACCAATCCCCATGCCTATGTCGACAGCAATATCGTCGGTTTCGTCAACATCCTGGAAGCCTGCCGGCATAATG
GAGTGGGCCACTTGGCCTATGCCAGCAGTTCCAGTGTCTACGGGCTGAATGAGACGATGCCCTTCAGTACCCACGACAAC
GTGGATCATCCCATCAGCCTCTATGCCGCCAGCAAAAAGTCCAACGAACTGATGGCCCACACCTACAGCCACCTCTACGG
TCTTCCTACCACCGGCCTGCGCTTCTTCACCGTCTACGGCCCCTGGGGACGCCCCGATATGGCCCTCTTTCTCTTCACCA
AAGCGATCCTGGAAGATCGTCCCATCGATGTCTACAACTACGGAGAGATGCAGCGGGATTTCACCTATGTCGACGATATC
GTCGAAGGACTGGTCCGGGTGATCGACCATCCCCCCAAAGGCAATCCTGAGTGGAGCGGCAAAGCCCCCGATCCCGGCAG
CTCCAGAGCTCCCTACAAAATCTACAACATCGGCAATAACAACCCCGTCAAACTGATGGATTTCATTACGGCTATCGAAG
AGGCGATCGGGAAGGAAGCGAAAAAGAATCTTCTGCCGATCCAACCCGGTGACGTACCGGCCACCTATGCCGATGTCAGT
GACCTGATCGAGGACCTGGGTTATAAACCTGAGACTCCCATCAAAGAAGGAATCAATCGTTTTGTAGAGTGGTATCGTCA
GTTTTACAATGTGTAA

Protein sequence :
MKILVTGTAGFIGFHLAKRLLERGDEVVGLDNINDYYDPKVKYGRLRETGIEGDEAIEYAKPVQSSRYENYRFIKLNLED
RAAIEELFEKERFDAVCNLAAQAGVRYSLTNPHAYVDSNIVGFVNILEACRHNGVGHLAYASSSSVYGLNETMPFSTHDN
VDHPISLYAASKKSNELMAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFLFTKAILEDRPIDVYNYGEMQRDFTYVDDI
VEGLVRVIDHPPKGNPEWSGKAPDPGSSRAPYKIYNIGNNNPVKLMDFITAIEEAIGKEAKKNLLPIQPGDVPATYADVS
DLIEDLGYKPETPIKEGINRFVEWYRQFYNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-102 62