Gene Information

Name : Nitsa_1826 (Nitsa_1826)
Accession : YP_004168820.1
Strain : Nitratifractor salsuginis DSM 16511
Genome accession: NC_014935
Putative virulence/resistance : Virulence
Product : prophage cp4-57 regulatory
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1802054 - 1802254 bp
Length : 201 bp
Strand : +
Note : InterPro IPR010260; KEGG: rso:RSc1897 hypothetical protein; PFAM: Prophage CP4-57 regulatory; SPTR: Probable prophage regulatory transcription regulator protein; PFAM: Prophage CP4-57 regulatory protein (AlpA); TIGRFAM: DNA binding domain, excisionase fam

DNA sequence :
ATGAGTCTGGAATACATGGGCCGGGTTGACCGGCTGCTGAACATCAAACAGGTGTCCGAGAAAACTTCACTCGGGCAAAC
GAAGATCTACGAAATGATCAAGCTGAACGAGTTCCCGCCCCCGGTCAAATTGGGCCGCTCCAGGCGCTGGAGAGAGTCCG
ACATAGACCGCTGGATAGCCTCCCTACCGCTCGCAGTATAA

Protein sequence :
MSLEYMGRVDRLLNIKQVSEKTSLGQTKIYEMIKLNEFPPPVKLGRSRRWRESDIDRWIASLPLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 6e-04 44
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 6e-06 44
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 6e-06 44
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 4e-06 44
unnamed CAA21398.1 - Not tested HPI Protein 8e-05 42
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 6e-05 42
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-04 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nitsa_1826 YP_004168820.1 prophage cp4-57 regulatory VFG1118 Protein 2e-06 44