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Name : Nitsa_1378 (Nitsa_1378) Accession : YP_004168378.1 Strain : Nitratifractor salsuginis DSM 16511 Genome accession: NC_014935 Putative virulence/resistance : Unknown Product : ssra-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1378600 - 1379061 bp Length : 462 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: sun:SUN_0375 SsrA RNA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCCATCAAAATCATCGCACAGAACAAAAAAGCCAGACACGAATACGAGATCCTCGAGAAGTATGAAGCGGGGATCGA GCTGCAGGGAAGCGAAGTCAAGGCCCTGCGCCAGGGGCGGGTCAACATCAACGATGCCTACTGCCGCTTCATCAAAGGGG AGCTCTGGCTGCTCAATGCCCATATCGGCCATCTCGATACCGCCAACCGCCACTTCGCCAGAGATGAGCGGGCCCCAAGA AAGCTGCTGCTGCACAAAAAACAGCTCCACTCCCTCTACGGCAAAGTGAGTCGCGAAGGGCTCACCATCGTGCCGCTGAT GCTCTATTTCAACGAACGCAACCGGGCCAAACTCTCCATCGCCCTAGCCAAGGGAAAGAAACTCCACGACAAACGCGAAA CCCTCAAACGCCGCACCATGGAGCGGGAAGCCGCCCAGGCGATGAAAAACCGCGATTATTAG Protein sequence : MAIKIIAQNKKARHEYEILEKYEAGIELQGSEVKALRQGRVNINDAYCRFIKGELWLLNAHIGHLDTANRHFARDERAPR KLLLHKKQLHSLYGKVSREGLTIVPLMLYFNERNRAKLSIALAKGKKLHDKRETLKRRTMEREAAQAMKNRDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-19 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-21 | 47 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-17 | 45 |
