Gene Information

Name : Celal_2675 (Celal_2675)
Accession : YP_004165458.1
Strain : Cellulophaga algicola DSM 14237
Genome accession: NC_014934
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3085838 - 3087697 bp
Length : 1860 bp
Strand : +
Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: zpr:ZPR_0137 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRF

DNA sequence :
ATGAAAAGCAAAGACACCGCACCAAAAAACGAAAAGCTAACGACACAACCTTTTCCAAATTCAAAAAAGATTTATGTAGC
AGGTAAATTGCATCCACAATTAAAAGTGGCCATGCGAGAAATTGCACTGAGTGATACTAAAGATTCTCTTACAGGCAAGC
TTACACCAAATGAATCTGTTACAGTTTATGATACTTCTGGCCCTTATACCGATCCAGATAAATCTATAAATGTACATCAA
GGTATTGAAAGAATCCGTGAGCAATGGATTTTAGACCGTGGAGATGTACAGCAATTAAATAGCTTTACTTCTGAGTATTG
TAACCAACGGCTAAATGACAAAAGCCTAGATCATATGCGTTTTTCACTTTTAAAGAAGCCAATGCGTGCTCAGGATGGTA
AAAATGTTACCCAATTACACTACGCAAAAAAGGGAATTATTACTCCAGAGATGGAATATATTGCTATTCGTGAGAACCAA
CGTATGGAGGAAATGACGGAGATAGCAAAACAACATAAAGGAGAACATTTTGGAGCATCTATACCTAATAAAATTACAGC
AGAATTTGTTCGTGAAGAAGTCGCTAGAGGTAGAGCCGTAATCCCTTCAAATATTAACCATCCAGAAGCAGAGCCCATGA
TATTAGGGCGTAACTTCTTGGTAAAAATAAATGCCAATATTGGTAATTCTGCCGTAACCTCTTCCATTGAGGAAGAAGTA
GAGAAAGCCGTTTGGGCATGCCGTTGGGGAGCAGATAATATTATGGACTTATCTACGGGTCAAAATATACACGAAACTCG
GGAATGGATTATCCGTAATTCTCCAGTACCTGTAGGAACGGTGCCTATTTATCAAGCATTAGAAAAAGTAAACGGAGTAG
CGGAAGACCTTACATGGGAAATTTTTAGAGATACACTTATAGAGCAGGCAGAGCAAGGAGTAGATTATTTTACCATTCAT
GCGGGTGTTCTTTTACGCTATGTGCCCATGACTGCTAAACGTGTTACAGGAATTGTTTCTCGTGGTGGGTCTATTATGGC
AAAATGGTGTTTAGCGCATCATAAAGAAAGTTTCTTGTATACACATTTCGAAGATATTTGCGAAATACTAAAACAATATG
ATGTAGCTTTTTCTTTAGGAGATGGTTTACGTCCTGGTTCTATTGCCGATGCTAATGATGAGGCGCAGTTTGCGGAACTA
GAAACATTGGGAGAACTAACTAAAATTGCACGTAAGCACGAAGTACAATGTTTTATAGAAGGTCCTGGTCACGTGCCAAT
GCATATGATTAAAGAAAATATGGAGAAACAAATAGAACTTTGTGATGAAGCTCCTTTCTATACTTTAGGTCCCTTAACTA
CAGATATTGCTCCGGGTTATGATCATATTACTTCTGGTATTGGTGCTGCAATGATTGGCTGGTTTGGTTGTGCAATGTTG
TGTTATGTAACGCCAAAAGAGCATTTGGGCTTACCCAATAAGCAAGATGTACGTACGGGAGTAATTACGTATAAGTTAGC
GGCACATGCAGCAGATTTGGCAAAAGGACACCCAGGAGCACAACATAGAGATAATGCCTTATCAAAAGCACGATTTGAAT
TCCGATGGGAAGATCAGTTTAATCTAGGTTTAGATCCGGAATTAGCGCGCGAATATCACGATGAAACCTTACCAGCAGAT
GGTGCAAAAGTGGCCCATTTTTGTTCTATGTGCGGACCAAAATTCTGTTCTATGAAAATATCGCAAGAAGTAAGAGATTT
TGCAGCAGAACATGATATTGTAGATAACGAAGTCATTCAAAAAGGGATGGATGAAAAGTCTAAAGAGTTTAAAGAAAAAG
GATCAGAAGTGTATTTGTAA

Protein sequence :
MKSKDTAPKNEKLTTQPFPNSKKIYVAGKLHPQLKVAMREIALSDTKDSLTGKLTPNESVTVYDTSGPYTDPDKSINVHQ
GIERIREQWILDRGDVQQLNSFTSEYCNQRLNDKSLDHMRFSLLKKPMRAQDGKNVTQLHYAKKGIITPEMEYIAIRENQ
RMEEMTEIAKQHKGEHFGASIPNKITAEFVREEVARGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSAVTSSIEEEV
EKAVWACRWGADNIMDLSTGQNIHETREWIIRNSPVPVGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIH
AGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEDICEILKQYDVAFSLGDGLRPGSIADANDEAQFAEL
ETLGELTKIARKHEVQCFIEGPGHVPMHMIKENMEKQIELCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAML
CYVTPKEHLGLPNKQDVRTGVITYKLAAHAADLAKGHPGAQHRDNALSKARFEFRWEDQFNLGLDPELAREYHDETLPAD
GAKVAHFCSMCGPKFCSMKISQEVRDFAAEHDIVDNEVIQKGMDEKSKEFKEKGSEVYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68