Gene Information

Name : Celal_0233 (Celal_0233)
Accession : YP_004163081.1
Strain : Cellulophaga algicola DSM 14237
Genome accession: NC_014934
Putative virulence/resistance : Virulence
Product : RNA-directed DNA polymerase (reverse transcriptase)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 251452 - 252705 bp
Length : 1254 bp
Strand : -
Note : COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477; IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: Reverse transcriptase; Group II intron, maturase-specific; SPTR: uncharacterized protein; PFAM: Reverse transcriptase (RNA-depe

DNA sequence :
ATGATTTTTAAAGAACAAACAAAGTCGATTCCCATAACCAAGGAAATGGTGTGGGAGTCCTACAAGAAGGTAAAAAGTAA
CAGAGGAAGTGCCGGGATAGACCATCAAACCCTATCGGAATTCGATAGTGTACGTTCCAAGGAACTGTACAAGGTTTGGA
ATAGACTGGCATCAGGAAGTTATTTTGCACCTGCGGTAAAGCGGGTAAATATTCCAAAGGCAGGGGGCAAGACCCGACCT
TTGGGTATTCCCACGGTAAGCGATAGGATAGCACAACAAGTGGTGAAGCAGTACCTTGAACCTAGGTTGGAATCCATATT
TTCAGAAAACTCTTATGGATACCGTCCCAACAGGAGTGCACATTCGGCTATTGAAGTTGTACGTCGAAACGTACTACGAT
ACAGCTGGGTGATAGATCTGGATATACAGGAATTCTTTGAGAATGTAGACCATGGTCTTCTGCTGAAAGCTTTGGAACGC
CATGTTTCGGAGAAGTGGGTGTTGCTCTACATCAAACGGTGGCTGGAAGCTCCAGTAATACTAGAAGATGGAACGGTTAA
AATATCCACGGGCAAAGGAACACCTCAAGGAGGGGTGATCAGCCCACTTTTGTCTAATCTATATATGCATTACTGTGTGG
ACAAATGGTTAGAGCAATACCATCCACAGGTAAAGATGGTGCGTTATGCAGATGACTTGATTGTACATTGTAGAAGTTAT
GAGGCAGCTGTCCATACACTTGAAGTTCTAAAAGAACGTCTGACAGAGTGCGGTCTGACCGCGCATCCTGAAAAGACTAA
AATAGTGTACTGTAAGAAGGATGGCAGAGACCTCAAAGGGTATCCTGTACAATTCGATTTCTTAGGATTCAGCTTTCAAC
CGATAAGGTTCAGATTGAAAAAGGGAGGAAGCTTCCTTCAATTTGATTGTAAGATGAGCAGAAAATCTAAAGTTCGAATC
ACGGGAGAACTCCGTAAACTTGCTTTCCATAACAAAACTCAACGTGGGATACAGGATCTGGCAAATCTGCTGAACCCCAA
GATCCGTGGTTGGGTTCGGTATTATGGAAAGATAAGTCGTAGGAGTCTGCAACCTCTTTTCTATTACCTACACAATCGTA
TGCTCGGATGGATATTGAACAAGTATAAACGCTTCAAAGGAAGCAAAATCAAAGCTGTAAAATGGCTTAGGTTTATTACA
AAATCATATCCAAATCTGTTCTATCATTGGGAACTGGGGTACAAATTGGTCTAA

Protein sequence :
MIFKEQTKSIPITKEMVWESYKKVKSNRGSAGIDHQTLSEFDSVRSKELYKVWNRLASGSYFAPAVKRVNIPKAGGKTRP
LGIPTVSDRIAQQVVKQYLEPRLESIFSENSYGYRPNRSAHSAIEVVRRNVLRYSWVIDLDIQEFFENVDHGLLLKALER
HVSEKWVLLYIKRWLEAPVILEDGTVKISTGKGTPQGGVISPLLSNLYMHYCVDKWLEQYHPQVKMVRYADDLIVHCRSY
EAAVHTLEVLKERLTECGLTAHPEKTKIVYCKKDGRDLKGYPVQFDFLGFSFQPIRFRLKKGGSFLQFDCKMSRKSKVRI
TGELRKLAFHNKTQRGIQDLANLLNPKIRGWVRYYGKISRRSLQPLFYYLHNRMLGWILNKYKRFKGSKIKAVKWLRFIT
KSYPNLFYHWELGYKLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 1e-91 46
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 6e-77 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Celal_0233 YP_004163081.1 RNA-directed DNA polymerase (reverse transcriptase) VFG1512 Protein 3e-77 43