|
Name : Celal_1867 (Celal_1867) Accession : YP_004164665.1 Strain : Cellulophaga algicola DSM 14237 Genome accession: NC_014934 Putative virulence/resistance : Unknown Product : tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2128292 - 2130415 bp Length : 2124 bp Strand : - Note : COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641; IPR022967; IPR018974; IPR003029; KEGG: fbc:FB2170_04335 RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMAR DNA sequence : ATGCAACTTATCCCCTACTTACTAAAGCACACTCAACTCGTAGAAAAAAATATAGTCAATACGGTAGAACTTTTAGATCA AGACTGTACTATTCCCTTCATATCTAGGTATCGAAAAGAAAAAACAGGAAATCTAGATGAAGTTCAGATTGGTGATATTG TAAAATTCAAAGAACTTTTTGAAGCGCTAGAGAAGAGAAAATTAGCCATCATTAAATCGGTTGATGAACAAGAGTCACTC ACTTCTGAGCTTAAGAAAAAGTTTCAAGATGCTCCAGATCTTACTTCGCTAGAAGATTTATACCTGCCTTTTAAGAAAAA AAGAAATACAAAATCTGAAGTAGCTATTAAAAATGGCTTAGAGCCTTTGGCTAAAATCATCATGGCACAAAATAATGATG ATATTGATTACATCGCAACGCAGTATTTGAATGATGCTATTCCCAATGAAGATGAAGCTATTGAAGGCGCTCAGCATATT ATTGCAGAATGGATTAATGAACGTACTGATGTTAGAAATCAAATTCGTCATCAATTAGAGAAATTTGCACAAATAACCAC CAAGGTTGTTGGCACCAAAAAAGACGATGAAAAAGCGCAAAAATTCCGTGATTATTTTGATTGGAGCGAGGCTTTAAACC GCTGCCCTTCCCATAGGTTACTTGCTATTTTACGTGCAGAGAACGAAAAATTTATCCGCGTAAAAATAGTCATTGAAGAC GAGCGTACGATAGAAAAAGTGGAAGACCGAATTATAAAAAACAGAAGCTCTAGTTCAAAATATATAAAAGCAGCGATAGA AGATGCCTATAAGCGTCTTTTATATCCTTCTTTATCTAATGAAACACTCAAACTTGCTAAAGAAAAAGCAGACGCAGATG CTATAGATGTTTTTTCTAAAAACTTAAAACAATTATTGCTTGGTGCTCCGTTAGGGGAAAAACGTATTCTAGCTATAGAT CCTGGTTTTAGAAGCGGTTGTAAAGTGGTTTGTCTAAGTGCACAAGGAGATTTAGTCCATAATGAGAATATCTACCCACA TGCTCCACAAAATGATAGCACAGGCGCTATAAACAAAATAAGCAGTTTGGTAGATGAATATAAAATAGAAGCAATTGCTA TTGGTAATGGTACGGCATCTAGAGAGACAGAACAATTGGTGAAACGCATTATTTTTAAGAACCCTATTGAAGTATATGTG GTGAGTGAAGCAGGAGCATCTATCTACTCCGCCTCAAAAATAGCACGAGACGAGTTCCCAAATTTTGATGTTACCGTTCG TGGCTCTGTTTCCATTGGAAGGCGACTAGCAGACCCTTTGGCTGAATTGGTGAAAATAGACCCAAAATCTATTGGTGTTG GCCAATACCAGCATGACGTAGATCAGTCTAAATTAAAATCTTCCTTAGATACCGTTGTAGAAAGTTGTGTAAATGCTGTT GGGGTAAATATTAATACGGCCAGTGTTCCTTTGCTGAGTTATGTTTCAGGGATTGGACCAAAATTAGCAGAAAACATTGT CGCCTATAGAAATGAAAATGGTGCGTTTACCAGCAGAACAGAAATTAAAAAAGTACCCCGTCTAGGTGGAAAAGCTTTTG AACAAGGTGCTGCATTTTTAAGAATTAAAGATGCTAAAAATCCGCTAGATGATTCTGCAGTGCACCCTGAACGTTATGAT TTGATTAAAAGCATGGCGAAAGAAAAAGGTATTTCTATTAAAGAAATTATAGGAAATAAAAGTATCTTAGAAAGCATAAA CCTAAATGCGTATTGTAGCGAAGATATTGGTTTGCCCACTTTAAAAGATATTGTAAAAGAACTGGAGAAGCCTGGTTTGG ATACCCGCGAAAAAGCAAAAGTATTTACGTTTGACCAACATATAAAATCGATTACCGATTTACACGAAGGACTAGTACTT CCTGGTATTGTAAACAACATTACCAATTTTGGTTGCTTTGTAGATATCGGAATAAAAGAAAGTGGCCTGATTCATATTTC TAACCTCTCTGATACTTTTGTAAAAGATGTGAATGAACATGTAAGTTTACAACAACAAATAACTGTAAAAGTGATGGAAG TTGATGTGGCTCGTAAACGCATTCAACTCGCATTACAGAAATAA Protein sequence : MQLIPYLLKHTQLVEKNIVNTVELLDQDCTIPFISRYRKEKTGNLDEVQIGDIVKFKELFEALEKRKLAIIKSVDEQESL TSELKKKFQDAPDLTSLEDLYLPFKKKRNTKSEVAIKNGLEPLAKIIMAQNNDDIDYIATQYLNDAIPNEDEAIEGAQHI IAEWINERTDVRNQIRHQLEKFAQITTKVVGTKKDDEKAQKFRDYFDWSEALNRCPSHRLLAILRAENEKFIRVKIVIED ERTIEKVEDRIIKNRSSSSKYIKAAIEDAYKRLLYPSLSNETLKLAKEKADADAIDVFSKNLKQLLLGAPLGEKRILAID PGFRSGCKVVCLSAQGDLVHNENIYPHAPQNDSTGAINKISSLVDEYKIEAIAIGNGTASRETEQLVKRIIFKNPIEVYV VSEAGASIYSASKIARDEFPNFDVTVRGSVSIGRRLADPLAELVKIDPKSIGVGQYQHDVDQSKLKSSLDTVVESCVNAV GVNINTASVPLLSYVSGIGPKLAENIVAYRNENGAFTSRTEIKKVPRLGGKAFEQGAAFLRIKDAKNPLDDSAVHPERYD LIKSMAKEKGISIKEIIGNKSILESINLNAYCSEDIGLPTLKDIVKELEKPGLDTREKAKVFTFDQHIKSITDLHEGLVL PGIVNNITNFGCFVDIGIKESGLIHISNLSDTFVKDVNEHVSLQQQITVKVMEVDVARKRIQLALQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-140 | 46 |
