Gene Information

Name : Bache_2947 (Bache_2947)
Accession : YP_004162468.1
Strain : Bacteroides helcogenes P 36-108
Genome accession: NC_014933
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3506960 - 3507409 bp
Length : 450 bp
Strand : -
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344: IPR000424; KEGG: bfs:BF1571 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: sin

DNA sequence :
ATGTCAGTAAATAAAGTGATATTGTTAGGAAATGTAGGCAGAGATCCGGAAGTGAGATATCTTGATAGCGGTGTTGCCGT
AGCGACTTTTCCTTTGGCTACTTCGGATCGTGCCTATACATTGGCAAACGGAACTCAAGTTCCTGAACGTACGGAATGGC
ATAACCTCGTCCTTTGGCGTGGATTGGCGGAAACTGCTGAAAAATACGTACATAAAGGAGATAAACTTTATGTGGAAGGC
AAGATTCGTACTCGTTCGTATGATGACCAGACGGGAGCCAAACGTTACGTGACGGAAATATTTGTGGATGTAATGGAAAT
GCTATCCCCTAAAGTTGCCTCCACGCCGGGAAGTGCTCCATTTGCTCAACAAGCTGCTTCCACAGCGACTGTACAGCAAC
CGCAGAGTAATCCTGTGCAAGATAATCCGGCAGACGACTTGCCGTTCTAA

Protein sequence :
MSVNKVILLGNVGRDPEVRYLDSGVAVATFPLATSDRAYTLANGTQVPERTEWHNLVLWRGLAETAEKYVHKGDKLYVEG
KIRTRSYDDQTGAKRYVTEIFVDVMEMLSPKVASTPGSAPFAQQAASTATVQQPQSNPVQDNPADDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 1e-18 45
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 8e-20 41
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 8e-20 41
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 5e-20 41
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-12 41