Gene Information

Name : Bache_0255 (Bache_0255)
Accession : YP_004159871.1
Strain : Bacteroides helcogenes P 36-108
Genome accession: NC_014933
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 358525 - 359241 bp
Length : 717 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: bfr:BF0561 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: uncharacterized protein

DNA sequence : 
GTGATACAATTAAAAGACATCAACAAGACCTACAACAACGGAGCACCTCTGCATGTACTCAAAGGCATCGACCTCAATAT
AGGGAAAGGGGAATTTGTCTCCATCATGGGAGCATCCGGTTCCGGAAAGTCCACACTGCTCAACATATTAGGCATTCTGG
ACAATTACGACACCGGCGAGTATTACCTCAACGGTACTCTTATCAAGAATCTCAGTGAAACGAAAGCGGCAGAATACCGT
AACCGCATGATCGGCTTCATCTTCCAGTCATTCAACCTCATTTCATTCAAAAATGCAGTGGAGAATGTTGCACTCCCCCT
CTTTTACCAGGGAGTGGGTCGCCGCAAACGCAATGCAATGGCTTTGGAATACCTTGACCGTCTGGGACTGAAGGAGTGGG
CAAACCACATGCCCAATGAAATGTCCGGTGGGCAGAAACAGCGTGTAGCCATTGCCCGCGCACTTATCACCCGGCCACAG
ATTATCCTTGCCGACGAACCTACCGGAGCACTGGACAGTAAAACATCCGTGGAAGTGATGCAAATTCTGAAAGACCTGCA
CAAAACAGGAATGACTATCGTAGTCGTCACTCATGAGAGTGGTGTCGCCAACCAGACGGATAAAATCATCCATATCAAGG
ACGGCGTGATAGGAAGCATCGAGGAGAACCTGAACCACGACGCAAGTCCTTTCGGACAGAATGGATATATGAAATAA

Protein sequence : 
MIQLKDINKTYNNGAPLHVLKGIDLNIGKGEFVSIMGASGSGKSTLLNILGILDNYDTGEYYLNGTLIKNLSETKAAEYR
NRMIGFIFQSFNLISFKNAVENVALPLFYQGVGRRKRNAMALEYLDRLGLKEWANHMPNEMSGGQKQRVAIARALITRPQ
IILADEPTGALDSKTSVEVMQILKDLHKTGMTIVVVTHESGVANQTDKIIHIKDGVIGSIEENLNHDASPFGQNGYMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bache_0255 YP_004159871.1 ABC transporter related protein NC_012469.1.7686878. Protein 2e-58 54
Bache_0255 YP_004159871.1 ABC transporter related protein CP001581.1.gene798.p Protein 5e-43 45
Bache_0255 YP_004159871.1 ABC transporter related protein CP001581.1.gene598.p Protein 1e-37 45
Bache_0255 YP_004159871.1 ABC transporter related protein NC_008702.1.4606598. Protein 9e-41 45